Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01515 ATGGGGGTGCCTGCAACTTTGGGCGATGATTTTCTGAGAGAAAGAGCGGCGAAGATGAGAGAATCACTGCAGAAGAGCCAAACTATTACTGATAACGTCGTCTCCATACTCGGCTCCTTTGATCACCGTCTTTCAGCTCTCGAGACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGACAAGACTTTGAAGTCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAGACGAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCAATTGGTCTATTAAGAAACAATATCAAATTCTTTAGCGGCCATAAAGGTTTTAAGGGCAACGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAGGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAACGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGGAAAGAATCCCTCCTCAAATCATCATTCTGCACATCATGATAATAACTTAGAGAATGCTGTCTACACACCTCCCACTCTCATACCACCACGTGTTCTGCCACTGCTACACGATTTATCACTGCAAATGGTTCAAGCCGGTCATCAACAACAAATTTTAAAAGTCTACAGGGATACCCGTTCAGTCGTTATGGAAGAAAGCCTACGGAAATTGGGAGTTGAAAAACTTAGCAAAGAAGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGTTGTTTGCTGGAGAACGAAAAGTTTGTGATCAAATATTTGAAGGCCTTGAATCGCTTAAAGATCAATCATTTGCTGAGGTTACAGGTAGTAGTGTGTCTGTGCTATTTAGTTTCGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATAATGCGAGAGCTTCACTCCGAGATTGAGACAATTTTCAAGGGTAAAGCGTGCAGTGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTAGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTAGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTGAAATTTCTATTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGAGAGTGGTCAAACGAGTTCAGAACTGGCCACTGTCACAATGCAAATTATGCAGGCTCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACCTATTCCTCATGAACAATATTCACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTCGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAGCAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTTTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCCGGCGGTGGCAGCGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACGTTCAATATGCAGTTTGAGGAACTACATCAAAGACAATCTCAATGGGCAGTTCCCGACACTGAGCTGCGGGAGTCCCTACGACTTTCGGTTGCTGAAGTCTTACTTCCTGCATACCGATCCTTCCTAAAACGTTTTGGGCCACTAGTTGATGTTGGAAAGAATCCCCAAAAGTATGTCAGGTACCAGCCAGAAGATCTCGAAAGAATGCTCGGAGAATTTTTCGAGGGGAAGAACTTGAGCGAACCGAAGCGGTAG 1956 43.2 MGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGLLRNNIKFFSGHKGFKGNEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGGKNPSSNHHSAHHDNNLENAVYTPPTLIPPRVLPLLHDLSLQMVQAGHQQQILKVYRDTRSVVMEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGLESLKDQSFAEVTGSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACSEIKESASGLTKRLAQTAKDTFSDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEESGQTSSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDVGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7747077 7753548 - CmoCh04G015150.1 Cmo04g01515 380490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01515 651 MobiDBLite consensus disorder prediction 169 205 - -
Cmo04g01515 651 MobiDBLite consensus disorder prediction 171 190 - -
Cmo04g01515 651 Coils Coil 130 150 - -
Cmo04g01515 651 Gene3D Exocyst complex component Exo70 184 651 - -
Cmo04g01515 651 Gene3D Exocyst complex component Exo70 76 181 - -
Cmo04g01515 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Cmo04g01515 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Cmo04g01515 651 SUPERFAMILY Cullin repeat-like 78 642 IPR016159 -
Cmo04g01515 651 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01110 Cmo-Chr3:8945812 Cmo04g01515 Cmo-Chr4:7747077 0 dispersed
Cmo04g01515 Cmo-Chr4:7747077 Cmo07g00855 Cmo-Chr7:4035693 1.56E-125 dispersed
Cmo07g00854 Cmo-Chr7:4034055 Cmo04g01515 Cmo-Chr4:7747077 5.59E-35 dispersed
Cmo17g00621 Cmo-Chr17:6530930 Cmo04g01515 Cmo-Chr4:7747077 4.17E-56 dispersed
Cmo18g00956 Cmo-Chr18:10655880 Cmo04g01515 Cmo-Chr4:7747077 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01515 K07195 - csv:101206262 1206.05