Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01620 ATGCCGTCGCCTCAGATTCTACCTATAACCCAGCCCCCTTCGTCGTCTCCACTTACCTCAAGGGCCTCAGATGCCAATTCGATTATGGAAACTTCATCTACTGCCTTAGACATAATGTTGCTTAAAGAAGACGATGAACAGAGGACTGGAGTTCTTGTTTCTCCGTTGTTTGAGGATGATAAGACGATAGCTTATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCTTCCAGCACATCCAGTTCATCCTCCGGAAGCAATACTTACAAGCAGAAGCGGAGGCGAGTCAAGAGCGAAAACTTTTTATCTTATCTTTCCGGTGACGGCCGCCACCAGACTATTGATCGTGATGTCGAGAATGCCGATGCTGATAGAGCTGAGAAATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATTACTGGAGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCCGAAAGAGGTATCATCGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTTATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTCGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCTCATATAGCTGCCTGCACACTTTTGGAGCAAGCAATGAAGGAGGTTCGCAAAGTAGAAAGTATCTCATGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTATCAGGAGGGTATAATTTACTCAATCTAGTAGACTACTTTCACTCTCGAGGTTTATATCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAATTATTGATCCTGGAAGAACCCAACATGGGAGCTGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGATTATTCTATACCATCAGATTCAAGTAAAACTTTTGCTGATACTCTTCAGAGCGTTGGAGTGAAAGCGGAAACATTTTTTTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCGTTGAGGGGAGGCAAAGATCAGATGTTTGAAGATCTTGTGGCGATCATCCATGCCGATGATGCAGAAGCCCTGGCTAAAGATGCGGTGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 42.64 MPSPQILPITQPPSSSPLTSRASDANSIMETSSTALDIMLLKEDDEQRTGVLVSPLFEDDKTIAYKPLLPRTSSYASSTSSSSSGSNTYKQKRRRVKSENFLSYLSGDGRHQTIDRDVENADADRAEKFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERGIIVACIDYRNFPQGTMSDMIYDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEQAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLYRSLFLSIMEGEQSLKRFSPELLILEEPNMGAAVSILPPIILFHGTADYSIPSDSSKTFADTLQSVGVKAETFFYEGKTHTDVFVQDPLRGGKDQMFEDLVAIIHADDAEALAKDAVAPPRRRLVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8262141 8267330 - CmoCh04G016200.1 Cmo04g01620 380595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01620 479 MobiDBLite consensus disorder prediction 12 27 - -
Cmo04g01620 479 SUPERFAMILY alpha/beta-Hydrolases 181 443 IPR029058 -
Cmo04g01620 479 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 109 469 - -
Cmo04g01620 479 PANTHER ARYLACETAMIDE DEACETYLASE 109 469 - -
Cmo04g01620 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cmo04g01620 479 MobiDBLite consensus disorder prediction 73 89 - -
Cmo04g01620 479 MobiDBLite consensus disorder prediction 1 27 - -
Cmo04g01620 479 Pfam BD-FAE 193 403 - -
Cmo04g01620 479 MobiDBLite consensus disorder prediction 73 95 - -
Cmo04g01620 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01620 Cmo-Chr4:8262141 Cmo14g00816 Cmo-Chr14:4209431 1.13E-173 dispersed
Cmo04g01620 Cmo-Chr4:8262141 Cmo01g00416 Cmo-Chr1:2024634 9.54E-177 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01620 K15889 - csv:101206426 858.211