Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01634 ATGGCCATTGATTCCTCTCCGAGCCTCGTTTATGGGCTGATGCTGCTGCTGCTTTCTGCTTTCTTTGCTCTGAGCCAGAGCTTGTATGACACAGGTGACCCCTCTTTGACGTTGGATTACTATGCCAAAACTTGTCCTAATGTGTTGCAGGTTGTGCGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGTAATGCAGCTTTTGCTGTCCGATTGCACTTTCACGACTGCTTTGTCCAGGGTTGTGATGGGTCAATTCTGCTGGACGACACTATAACACTACAGGGTGAAAAAAAGGCTTCCACCAACATACACTCCCTCAAAGGCTATAGAATGATGGATAGGATAAAGAACAGCCTTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCTGATATACTCACTATTGCAGCCAGGGATGCAGTGATTCTGGTGGGCGGCCCTTACTGGGAGGTCCCTCTTGGAAGAAAGGATTCCACAACTGCAAGCTATGAACTTGCAAACCAAAATCTTCCCTCTGCCAATGAGGGCCTTATGAGCATCATCTCCAAGTTTCTTTATCAGGGCCTCTCCGTAACTGACATGGTAGCTCTATCAGGAGCGCACACGATTGGAATGGCGAGGTGCAAGAATTTCAGGGAAAGGATTTATGGGGATTTCGAAGCGACTTCGGATGCTAACAACCCGATTTCGAAGATGTATATCGAAAAGTTGAGGTCTATATGTCCTCCAATTGGGAAAGATGCAGAGAAGAACATAACAGGAATGGACAATGTGACGCCAGAGGTGTTTGATAACTCCTATTTCCAGATGTTGATGAGAGGAGAAGGGGTTTTGAATTCAGATCAGGAATTGTATTCCAGCCTTCTGGGCATGGAAACCAGGGCGCTGGTGAAGAAATATGCCGTTGACCCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAATTGGGAAATATCACCAACTCTGATAGCTTTTTGAGTGGGGAAGTTAGGAAAAATTGCAGGTTTATCAACACATGA 1032 45.83 MAIDSSPSLVYGLMLLLLSAFFALSQSLYDTGDPSLTLDYYAKTCPNVLQVVRKEMECAVLSDPRNAAFAVRLHFHDCFVQGCDGSILLDDTITLQGEKKASTNIHSLKGYRMMDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRKDSTTASYELANQNLPSANEGLMSIISKFLYQGLSVTDMVALSGAHTIGMARCKNFRERIYGDFEATSDANNPISKMYIEKLRSICPPIGKDAEKNITGMDNVTPEVFDNSYFQMLMRGEGVLNSDQELYSSLLGMETRALVKKYAVDPLAFFQQFSDSMVKLGNITNSDSFLSGEVRKNCRFINT 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8353182 8357171 - CmoCh04G016340.1 Cmo04g01634 380609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01634 343 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Cmo04g01634 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Cmo04g01634 343 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 ProSiteProfiles Plant heme peroxidase family profile. 35 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PANTHER PEROXIDASE 11 28 341 - -
Cmo04g01634 343 Gene3D Peroxidase, domain 2 173 320 - -
Cmo04g01634 343 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 Gene3D - 39 342 - -
Cmo04g01634 343 PANTHER PEROXIDASE 72-RELATED 28 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 CDD secretory_peroxidase 36 341 IPR033905 GO:0004601|GO:0042744
Cmo04g01634 343 Pfam Peroxidase 52 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g01634 343 SUPERFAMILY Heme-dependent peroxidases 36 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01634 Cmo-Chr4:8353182 Cmo19g00456 Cmo-Chr19:5523601 4.44E-97 dispersed
Cmo18g01093 Cmo-Chr18:11430040 Cmo04g01634 Cmo-Chr4:8353182 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01634 K00430 - csv:101216779 571.622