Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01689 ATGGTGCAAGGGAATCTGGTTAGCCTTAACCTTACGTATTGTGTTGTATCACACAAGCTGGACGAAGGAATAGAGACTAGATGGTGGCTTGAGCATGAGAGCTTGGAACCTCTCAGCCCTTCATATGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGGAGTACCCTAGAAAAGAAACTCGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGTGCACAAATCAGCAAATGCTGTACAAGAAAAGGGATTTAACTTCGATGATGCTAGGCTGATGAGAGGAGCATGGAGAAATGAACCCAACTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTCCCTGAGGGAGACGAATCCCCAGAAAAGATCATTTATCAAGCTGCATCACCTGATGAGGCTGCTTTAGTAACTGCGGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGCACACCTACTACAATATATGTTCGAGAATCTCATGTTGAGAAGATGGGAAAAATCCAAGATGTTTCATATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTTGTGTGTCGTTATTCTGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATTTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTTTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAGTTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAACTTCAAGAAGGAGTACCAAACTGTATACAGACGCTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCGTGCAATTTAATAAACAATGAAATGAAGCAATTTATTATCAGTTCAGAAACGGATGCAATCCGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTACTAGAGAAGAAGTAAAAAGGGAACTGAAGCATTGTCTTGAGGAAGCGCAGCGGTGTTTACAATCTGTGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAGCTTGAGCTTGAATTGTAGTTCAGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTCAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCATCTCACGTGGGTGTTGGAATAAGTGGACAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTACTTCTTGTACATGGGCGATGGTCATATCTTAGAATATGCAAGTTTTGGTTCACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCGTTGTATAATGTCATATTTACCGCCCTACCTGTAATAATTGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTATCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGCATTTTTTAAGTGGAGAGTTTTCCAGCAGTCAATCGTCATCTGGCAGGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGTTTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTACATTACGCTGTTCTTCTTGTCCCCATTGTTGCACTTCTCTGTGATTTCGCGTACCAAGGGGCTGCAACCCATTTTTCATGGACAATTTTTTTGCGTGGATACAGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGCAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAGGAGGCAAGAAGTTATGCCATGTCTCAACTCCCTCGAGAATTATCGAAGCACACTGGCTTTGCTTTCGACTCACCCGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAAGAGAGCCAAAACTAGGCTTGAAGCTGTGGCGGTGGGGCTGTTTCTATGGATTTTAACCGTCGGCTCGCCACCACCGGGGAAAACAACAAGCTGGCCATGGCCGGCAGCTGGGTCTGAGGTTGAGGGAGGAAGCCCTGTGATGAAGCAGCTGAGTTTGTAG 2793 42.14 MVQGNLVSLNLTYCVVSHKLDEGIETRWWLEHESLEPLSPSYVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEVHKSANAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKIIYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKRELKHCLEEAQRCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLSLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQASHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNAFFKWRVFQQSIVIWQGVWSVGYQHDDFHMHCSDCEFAFAYDLQFNYPVALHYAVLLVPIVALLCDFAYQGAATHFSWTIFLRGYSIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVAKRAKTRLEAVAVGLFLWILTVGSPPPGKTTSWPWPAAGSEVEGGSPVMKQLSL 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8563848 8573842 - CmoCh04G016890.1 Cmo04g01689 380664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01689 930 Pfam Phospholipid-translocating P-type ATPase C-terminal 615 724 IPR032630 -
Cmo04g01689 930 ProSitePatterns E1-E2 ATPases phosphorylation site. 157 163 IPR018303 -
Cmo04g01689 930 Gene3D - 421 627 IPR023214 -
Cmo04g01689 930 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 756 885 - -
Cmo04g01689 930 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 220 426 IPR023299 GO:0000166
Cmo04g01689 930 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 43 718 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cmo04g01689 930 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 112 714 - -
Cmo04g01689 930 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 103 - -
Cmo04g01689 930 CDD P-type_ATPase_APLT_Dnf-like 43 723 - -
Cmo04g01689 930 SFLD Haloacid Dehalogenase 137 638 - -
Cmo04g01689 930 SUPERFAMILY HAD-like 143 630 IPR036412 -
Cmo04g01689 930 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Cmo04g01689 930 PRINTS P-type cation-transporting ATPase superfamily signature 155 169 - -
Cmo04g01689 930 Gene3D - 265 420 IPR023299 GO:0000166
Cmo04g01689 930 SFLD p-type atpase 137 638 IPR044492 -
Cmo04g01689 930 Pfam Cation transport ATPase (P-type) 256 347 - -
Cmo04g01689 930 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 560 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo04g01689 930 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 789 IPR023298 -
Cmo04g01689 930 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 756 885 - -
Cmo04g01689 930 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 112 714 - -
Cmo04g01689 930 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 42 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01689 Cmo-Chr4:8563848 Cmo15g01500 Cmo-Chr15:10177017 0 dispersed
Cmo04g00333 Cmo-Chr4:1625417 Cmo04g01689 Cmo-Chr4:8563848 3.99E-57 transposed
Cmo04g00332 Cmo-Chr4:1622553 Cmo04g01689 Cmo-Chr4:8563848 1.24E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01689 K14802 - mnt:21394275 1306.58