Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g01690 | ATGACGGAGAGGACCTCCTCTTCTAACACGGTTCGACTTGGCCGAGTCCAGCCGCAGGCTCCTGGACATCGTACCATCTTCTGTAATGATCGCGACGCTAATCTCCTTGTCAAATTCAAGGGGAATTCGGTCTCGACGACGAAGTATAACTTCTTCACTTTCTTTCCGAAAGGGTTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTTTAAAATTTGCAATTGCTAAGTGGTACACCATGTGCATTCATGAGATCTTGATTAGTCCTGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCGGCAAGATGGATATTTTCCTGCGGATATTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGATGGGGAGACAAATTTGAAGATTAGAAAGGCCCTGGAAAAGACGTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGGATGCAGTCTCAGGAACACTGAGTATATAGTTGGGGCTGTTATTTTTACTGGCCATGAAACAAAGGTTCAGACCAGACATTGA | 657 | 44.14 | MTERTSSSNTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISLKFAIAKWYTMCIHEILISPVHPITNVVPLSLVRQDGYFPADILFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNGCSLRNTEYIVGAVIFTGHETKVQTRH | 218 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 8573938 | 8579616 | - | CmoCh04G016900.1 | Cmo04g01690 | 380665 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g01690 | 218 | Gene3D | - | 108 | 217 | - | - | |
| Cmo04g01690 | 218 | SUPERFAMILY | Calcium ATPase, transduction domain A | 115 | 214 | IPR008250 | - | |
| Cmo04g01690 | 218 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 115 | 215 | - | - | |
| Cmo04g01690 | 218 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 115 | 215 | - | - | |
| Cmo04g01690 | 218 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 96 | - | - | |
| Cmo04g01690 | 218 | Pfam | Phospholipid-translocating ATPase N-terminal | 26 | 82 | IPR032631 | - | |
| Cmo04g01690 | 218 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 96 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g01690 | Cmo-Chr4:8573938 | Cmo04g00333 | Cmo-Chr4:1625417 | 1.09E-111 | dispersed | |
| Cmo04g01690 | Cmo-Chr4:8573938 | Cmo17g00688 | Cmo-Chr17:7022461 | 4.85E-43 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g01690 | K14802 | - | csv:101207069 | 344.354 |