Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01695 ATGCCTTCTCCCTCTCCCTCTCTTACTCTTCTCGCCATTCTTCTTTCCTTCTTCATTCACCTCGTCCAATCTCTGACCTCTTCTTGTCCGCCTTTCTCTTCCAAGCCCCTTTTCCCCTTCTCCTCTCTTCCTGGTCACGGCCATCCTTCCTTCCACCTGCGTTGCTCTTCTCCCCACTCTCTTCTCTCCATTAATGGCCTTTCATTTTCTCTCTTGAGTTTCAATGCCACCTCCTCCACTCTCCTCCTTTCCCCTCTTCCGCTCACTCTCAACGAATCCACCCACACCTGCTTTTCTCCTCGTTTCTCCTTCATTCCCACCCGTTCGATTAACTTCTCCGCCTCCCCGTTTCGAATCTCTGATGGGTATTGTTCTACACTCTCTGTTCTTCGCCCCTGTTCGCCTCCGCGCCTACCCAATTGCAGCCATTGCCCTTGGGACTGCAATCTTATCAAGAGACCTCTTCATTTGCTCCATGGATGCGGCGTCGAGCGTCGGTCTGTCTCGAAGCAAGGTTGTCAGGGGGAGGTGTTGGAGTATTTGGATCGAATTCTTAGATTGGGGATTGAAGTCGAGTGGGATACAGATCAGGACCCTTATTTTGTCAAGTGTAAAGATTGTGAAGCTAGAAATGGTGATTGTGGATTCAATTCCTCTGACCCAGATAGGCACTTCATTTGCTATCATACTCAAACTCGATACTCATTTCCTAACAAAATCGCGATTTTGTTCTCTGTTTTTGCGTTGATCTGCTTGTTTTTGGTTATTGCGGTGACCACGGTTTTTTTAAGGTCCAGATGGTTGAGATCCCTTGCTAGTGAAGTAGACCCCACAGCCCAGTTCCTCAGCCGTCATCGTTCACCTAATCTTCTCCCACCAGTTTTTCCCTACGAAGAGCTTGAGTCCTCAACTAATCGGTTCGACCCCAAGAGGAAACTGGGCGATGGTGGATTTGGGTCTGTTTATTTGGGTCAGCTTAACGATGGCCGATTAGTGGCTGTCAAGTATCTTCACAAGCACCACGGCGCCGTCGCCACCGCCCCCTCCGGCAGGGCTTTCTTCACCAAGTCGTTCTGTAACGAAATCTTGATTCTTTCTTCAATTAATCATCCGAATCTCGTTAGGTTACATGGGTATTGTAGTGACCCAAGAGGGCTTATTCTTGTCTATGATTATGTCCCAAATGGGACACTCGCCGACCATCTCCATGGCGCAAAGAGCTCGTATCGTAAGGGATCTCTGACTTGGCAAGTGAGGATTGACATTGCTCTGCAAATCGCCATGGCTATGGAGTATTTGCATTTCTCTGTGGCGCCGCCGATTGTTCACAGAGACATTACCTCTTCCAATATTTTCGTGGAGATCGATATGAGAATCAAGGTTGGGGATTTTGGGCTTTCAAGGCTGCTGGTTTTCTCAGATACGACGTCGTCGTCTTCATCTGGGTATGTCTGCACTGGTCCTCAGGGGACACCTGGTTACTTGGATCCGGATTACCACCGGTCCTTCCGGTTGACGGAGAAAAGTGACGTGTACAGCTTCGGAGTGGTGTTACTGGAGCTAATTTCTGGTTTAAAAGCGGTGGATCAGAGTCGAGAGAGAAGAGAAATGGCGCTGGCGGATCTTGTAGTGTCCAAGATCCAAATGGGTCAGCTTCATCAGGTGGTGGACTCCGTTTTGGGCATCGACGGCGAGGTAATCGACGGCGTTGAGGCGGTGGCAGAGCTAGCGTTTCGATGCGTGGCGGCAGACAAGGACGACCGACCCGACGCCAAGGAGATTGTTGAAGAGCTCCGGCGAATTCGGAACCGCACACGTGGAGGGGACCGGTCGTCGATTTCAAACGTGGGTGATGACGTGGATATACGTTGA 1872 50.11 MPSPSPSLTLLAILLSFFIHLVQSLTSSCPPFSSKPLFPFSSLPGHGHPSFHLRCSSPHSLLSINGLSFSLLSFNATSSTLLLSPLPLTLNESTHTCFSPRFSFIPTRSINFSASPFRISDGYCSTLSVLRPCSPPRLPNCSHCPWDCNLIKRPLHLLHGCGVERRSVSKQGCQGEVLEYLDRILRLGIEVEWDTDQDPYFVKCKDCEARNGDCGFNSSDPDRHFICYHTQTRYSFPNKIAILFSVFALICLFLVIAVTTVFLRSRWLRSLASEVDPTAQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHGAVATAPSGRAFFTKSFCNEILILSSINHPNLVRLHGYCSDPRGLILVYDYVPNGTLADHLHGAKSSYRKGSLTWQVRIDIALQIAMAMEYLHFSVAPPIVHRDITSSNIFVEIDMRIKVGDFGLSRLLVFSDTTSSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRERREMALADLVVSKIQMGQLHQVVDSVLGIDGEVIDGVEAVAELAFRCVAADKDDRPDAKEIVEELRRIRNRTRGGDRSSISNVGDDVDIR 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8597339 8599210 - CmoCh04G016950.1 Cmo04g01695 380670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01695 623 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Cmo04g01695 623 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 20 609 - -
Cmo04g01695 623 Pfam Protein kinase domain 309 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g01695 623 Pfam Wall-associated receptor kinase C-terminal 176 230 IPR032872 -
Cmo04g01695 623 CDD STKc_IRAK 313 601 - -
Cmo04g01695 623 SUPERFAMILY Protein kinase-like (PK-like) 287 598 IPR011009 -
Cmo04g01695 623 Gene3D Phosphorylase Kinase; domain 1 280 392 - -
Cmo04g01695 623 ProSiteProfiles Protein kinase domain profile. 307 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g01695 623 Gene3D Transferase(Phosphotransferase) domain 1 393 617 - -
Cmo04g01695 623 ProSitePatterns Tyrosine protein kinases specific active-site signature. 441 453 IPR008266 GO:0004672|GO:0006468
Cmo04g01695 623 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 609 IPR045274 GO:0007166
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01695 Cmo18g01212 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01695 Cmo-Chr4:8597339 Cmo13g01052 Cmo-Chr13:8782180 1.20E-92 dispersed
Cmo18g01212 Cmo-Chr18:12059910 Cmo04g01695 Cmo-Chr4:8597339 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74282 PF00069 Pkinase 4.10E-42 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01695 - - cmos:111458417 1212.21