Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01704 ATGGGTCGAAAGAGAGATAAACCTTACCCTTCCCCCCACCACTCTACGTCCTTCGCTAAGAGGCGGCGCCATCAGCCGCCGGCATCGTTGCCTGTGGAGGACGATGATGTGGACAAGCCCTTGCCTAAGCCTGCGCCGCCGATTGCCCTAGTCGTCGTTGACCTTCCGTCACACTGCTCGGTGCTTGACTTGAAGTCCCGATTTGAGATCTACGGATCCATCTCCCGCATCCGCATCGACCGTGATTGTGTTGGCTACATCATGTATCGTACCAAAGACTCCGCTGATGCTGCCATGGCCGCTGCCCTCGATCCCTCATTCGGCTTCACCATTGATTCCAAAAAGGTTCAGGTATTATGGGCGAATGATCCTCAAGTGCAATGGCGGCAAGGGATTAACGTTGGTGTTAATAAGAACAAGGAAATGTCATCGAAGCTCTTGCGGGCAGAAGTGCCACTGAGTAGACATGGAAGAGGCAATAAGCTTGCTTCAACCATTGTCAATCCCAGAAAAAGCAACAGTTCGTCAAGGTCCGATGAGCCTTTCAGGGGCAGGGAAGTTGTTGCTTACGATGATATTCTCTAA 585 51.97 MGRKRDKPYPSPHHSTSFAKRRRHQPPASLPVEDDDVDKPLPKPAPPIALVVVDLPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYIMYRTKDSADAAMAAALDPSFGFTIDSKKVQVLWANDPQVQWRQGINVGVNKNKEMSSKLLRAEVPLSRHGRGNKLASTIVNPRKSNSSSRSDEPFRGREVVAYDDIL 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8631260 8632942 - CmoCh04G017040.1 Cmo04g01704 380679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01704 194 SMART rrm1_1 49 119 IPR000504 GO:0003723
Cmo04g01704 194 MobiDBLite consensus disorder prediction 26 41 - -
Cmo04g01704 194 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 101 IPR000504 GO:0003723
Cmo04g01704 194 SUPERFAMILY RNA-binding domain, RBD 34 133 IPR035979 GO:0003676
Cmo04g01704 194 MobiDBLite consensus disorder prediction 1 41 - -
Cmo04g01704 194 MobiDBLite consensus disorder prediction 160 181 - -
Cmo04g01704 194 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 123 IPR000504 GO:0003723
Cmo04g01704 194 Gene3D - 9 137 IPR012677 -
Cmo04g01704 194 CDD RRM_SF 50 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01704 - - bhj:120081339 328.946