Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01754 ATGACGAGAGCTTTTAGAAGACGAAGTCTGTGTTCAAGGCCCATAGATCGTCTCCGATTCCAGGCATCGGCGGACGGTGCTCCGAAATCGGGATTCCTCAGAGATATGAAGGTGAAGGAGATCTTTACTTATTTGCTTATAGGTCTTCCGTTGGTCGTTTTTGTTGGTTTGGTGTTCAGGAATCCGGCGGCGGATCTGTCATTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTGGTCACTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTAGACTTTCCAATAGAGACAAGCTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGTAGATATCAATCCAGTTTATATCGAAGAATTTCGACCCACAGACCATCTCCTTACCTCATCTCGAAGCTTAGAGAGTACGAAGCGCTTCATCGACGCTGTGGTCCGCATACAAAACCATATGATGAAGCAGTAGAGCAGCTCAGATCTGGCAGTAGTGTTAGTTTGACGGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAATAAGATACTCACTTTGGCTTCTGCATTTCTCTATGCCGTTCTTACCGATCGTGTCTTGCTTGTCGATCCGGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAAACTTGGCTGCTACCAAATGACTTCCCCTTGATGGATCAATTCAGCAACTTTAATCAGAAATCTCCTAATTGTCATGGATATATGCTTAAGACGAACACGCTAAACGAATCGACAGAAGCGCTCCCATCCTATCTATACCTACATTTGGTTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATCAAGAACAGGCTCTTTTAAGTAGGGTCCCTTGGCTGATACTCAAGACAGATAACTACTTTGTTCCATCGCTCTTCCTGATCCCGTCTTTCGAGCATGAACTGAGTAACTTATTCCCCCAAAAAGACAACGTGTTTCATCATCTGGGTCGATATCTTTTCCACCCATCGAATCACGTTTGGGGACTGATTACGAGATACTACGACGCATATCTATCAAGTGCAGATGAATTGATAGGAATTCAAGTAAGAGTGTTCGAGATTGGATCGGGACCATTCGAACATATAATGGATCAGATTTTAAGCTGTACTCTTCAGGAGAAGATACTTCCCGGCGTAGACAAGGAAGGCTTCTCTTCGGTTTCCTTGGAACGCCCAAGAATGAAAGCGGTTTTGATGACATCCTTGAGTTCTGGATACTATGAAAAATTGAGAACCTTGTACTGGGAGTACCCAACCACAACGGGAGAGGTCATTGCAGTTCACCAGCCAAGCTACGAAATGTATCAGCAGACTGAGAAGAAGGCTCACAATAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTATGAGCGATTTATTGGTGACCAGTGCATGGTCGACGTTCGGGTACGTGGCTCAAGGGCTCGGGGGATCGAAGCCATGGATTCTTTACAAGGCGGAGAACATGAGCACGCCCAATCCAGCGTGTCGTAGGGCGATGTCAATGGAGCCTTGCTTTCATGCTCCTCCGTTCTATGATTGCAAGGCAAAGAAAGGAATAGATACTGGCGTAGTTGTTCCACATCCTCTTCGTAGGACTCTTTCAGCTCCGGCCGTTCCCTCTCGTTCTAGTGATCATTTCGTTGGTTTGGCAGATCATTGA 1734 45.33 MTRAFRRRSLCSRPIDRLRFQASADGAPKSGFLRDMKVKEIFTYLLIGLPLVVFVGLVFRNPAADLSLGFAEARALERVVTNGSSESSGSENGFSRLSNRDKLIGGLLIPGFDEGSCLSRYQSSLYRRISTHRPSPYLISKLREYEALHRRCGPHTKPYDEAVEQLRSGSSVSLTECKYVVWMSYSGLGNKILTLASAFLYAVLTDRVLLVDPGKDMADLFCEPFPEKTWLLPNDFPLMDQFSNFNQKSPNCHGYMLKTNTLNESTEALPSYLYLHLVHDYDDHDKLFFCDQEQALLSRVPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDNVFHHLGRYLFHPSNHVWGLITRYYDAYLSSADELIGIQVRVFEIGSGPFEHIMDQILSCTLQEKILPGVDKEGFSSVSLERPRMKAVLMTSLSSGYYEKLRTLYWEYPTTTGEVIAVHQPSYEMYQQTEKKAHNRKAWAEMYLLSMSDLLVTSAWSTFGYVAQGLGGSKPWILYKAENMSTPNPACRRAMSMEPCFHAPPFYDCKAKKGIDTGVVVPHPLRRTLSAPAVPSRSSDHFVGLADH 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8850998 8856168 - CmoCh04G017540.1 Cmo04g01754 380729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01754 577 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo04g01754 577 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo04g01754 577 Gene3D - 174 225 - -
Cmo04g01754 577 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 6 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00514 Cmo-Chr16:2484209 Cmo04g01754 Cmo-Chr4:8850998 1.42E-169 transposed
Cmo01g00838 Cmo-Chr1:4470695 Cmo04g01754 Cmo-Chr4:8850998 0 wgd
Cmo13g01199 Cmo-Chr13:9446633 Cmo04g01754 Cmo-Chr4:8850998 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01754 K13681 - csv:101216541 966.837