Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g01769 | ATGGCTGAATCCGTAAGGGGATATCACTCAATGAGGGATCTAAATGAAGAGTCTCATGGTTGTAGCTGGCCTTTATATTACAGTGAAAAATCGTGTCAGAGCAGCCCGTATTATAATGGAATTTTGCCAAGTGCTACCTCCGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTTCAGCACGAAGCCATATTCAAGAATCAAGTTTGCGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCCGAACACAGAGACCCAATGCCGGTAGACATATCATTCTCATCTAGTCCTCTAGCATCTCAAAGTACTCCTGATGGTGCAAGAAAATGGCATCTCCCAAGCTTTCCTCATGCCATTTCTTCTAGTGGCGGACCGTATGCGCCTAGTGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAAAGAATAACAGAAGCGATGGTCTCTTCCTATCCCAAAATGGAACGAGTTCAAAAGACTGTGAGGTACTAGAATCTAAACCCTCAAAGGTTAGGAGGAAAACATTTGATCTTCAACTTCCAGCAGACGAGTACATTGATAGCGAAGAGGGGGAGGTATTTCATGATGAAAAAGTGCCTCCCATGTTGGGTTTCCATTCAAACGGTAACAAGAAATTTGAGATTCAGGGTTGTGTGACGGCAAATCCTGGTGGAAAAAGTGATGTTAAAGGTGCTGCTTTGAGATCTGACTCGTGTTTATGGAACAGATATGGTTTGGCCAATTTAAACGAGCCCATTCAGGTTGAAGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAGTGCTCGTGGCTCCAGCAATTGGGAGGCTCAAGGCCCCATTGTATCATCTAGGAAGCAAGAAATGTTTCTGAGCTCCAGTAATGAAGGTGGACATGCAACAAATAGAAGAGCGGCATTCCCTAACATCTTTGAAGCAGGACGTAGTAAGGAAAGCGAGAAACCCGTTACTCGTGGTCAGATGGAAAATTTTCATGTATTTTCTAATCCTATGCAAGTTCCACTAAACAAGTTTCATGAACCTCCAGTTTTCTATGTCAATGATAGAAGCAAGGTTCAACAGGAGTTGGACAGGCCAGTTAGTGATTTGCATTTATCCAAAAGAAGTTATGAAATGTCTAATACTGGGGATCCTGGTTATCTTTTAGCTTCGCAGACATCTCGTACATATCCTATCGCTCCTTCTTTGGACGTGGGTAAGTCTTGGGCTCACTCTGGTTCATCTTGGGAAAAGCCAAATGGCAACGGCTCCCAGAAGTCAACATCAGGTCATACACAACCGTGTTTCAAATTGTCTGCTGCTGTGCACAAGAGTTTTCCTTCATCAGCCCAGAACAATAGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGGGTCTGGTTGTGATACTCCTTACCAGAATGGACTCTATCTCGGGTCTACGTCTGGCTCCAACGGAGGAGTTCTCGCCTCTACCGTAAGGCACGACCATGCTGCAAACTATTACAAGGGCTCTGGTTGTGTGGGCACGAATTCTCCGAAAGACATTAACTTGAATGTAATGCTCTCAAACAGTTTATCTAATGAGGCAGGTCAACAACCAAACTACCGGACCAGAGAGGCAGAACCAAACAATGAGGACCATCATAATGTATTACCATGGTCAAGGGCTGTACCTGCTAGTAAGAATGAAACGATCAATTCAAGCAGATTATCAATGACTGCAGAGCTTAATTTTGGGCTCTCTCCAAAGAACCAGTTTTCCAAAAGAAACGAAGCTGAACATGGCGGTAAAGTTGAATGTTGTCCGAACATTGAGTCTAATTCACGTTGTAGTAACATTGAGCCCAGAACGTCAGAACACGGTGAATGTCGGAGTAACAGAAAACTTCTTGGGTTTCCCTTTTTTGAAGGGCCATGCATTTCTAAGAATGAGTCATTTTCTGTTACATCCCCATCGGCACCTCTTCCTAATCCATCTGAGAATGAAGTGGACGATAAACGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTGTTTTTGATTCGGATAATGCTACTACCGGAGCTCTGGCTGTCGAGAATAGAAAGGACACAAAGATCTCTACTGTTAGAGTTCATATTGATTTGAACTCATGTGTCAGTGATGAAGAAGCTTCTATGAGACCTCTACCCTTGGCTTCTTCAAGTGCCAAGGAAAAGGTCATGGTAGAGATAGATTTAGAAGCCCCGGCACTGCCCGAGACTGAAGACGACATAATTGCAGAGGAAGAATCTGTAGAAAAACATCACGAACGGCGATCACAATCTCCTCAGCATATGGCTGTTGATATACAGGATGATCTTATGGCTGTAGCAGCAGAAGCAATAGTTGTCATCTCTTCTTGTGGTCATTCCTGTCATTTGGATGATACTGTTAGCAACGCGTTGGAAGATTCTTCGAGCGACCCCCTAAATTGGTTTGCCGAGGTAGTTTCCACACACGGAGATGATAAGCACACCAAGTCTGACACTGTATTTAGAGACAAAGAAGGCAAGGATAATGGTGAATCCTCTTTGAAAGGGATTGATTACTTCGAATACATGACTTTGAGGCTGGCGGAGGTCGGTGAAGAAGACTACATCCCGAAGCCCTTGGTCCCAGAAAATATGGAAATTGAAGAATCTGGAACCAATTTGTTGCAAAATCGATCCCGAAAGGGCCAGACGAGGAGAGGTAGGCAGCGAAGGGACTTCCAGAAGGATATCCTTCCAGGCCTTTCTTCACTATCAAGGCATGAGGTTACAGAAGATCTTCAGACATTTGGTGGCCTAATGCGAGCAACAGGCCACTCCTGGCATTCGGGAGTGACGAGGAGGAACTCTACTAGAAACGGTTGCGGTAGGGGAAGACGACGATCAGCGATCAGTCCCCCACCAGCTGTGCATTCAGAATGTAATCAGCCGATACAGCAACTAAGTAACATTGAAATGGTTCTGGAGGATGGAAGCCTGAGTGGTTGGGGCAAGACAACTAGACGGCCCCGTCGACAGAGATGCCCGGCTGGAACGCTCCGCCTGTCCCTTTAA | 3129 | 44.23 | MAESVRGYHSMRDLNEESHGCSWPLYYSEKSCQSSPYYNGILPSATSDAYLGCDRDAVKRTMLQHEAIFKNQVCELHRLYIKQRELMNDIKRSEHRDPMPVDISFSSSPLASQSTPDGARKWHLPSFPHAISSSGGPYAPSVEDVKSSLSSLKKNNRSDGLFLSQNGTSSKDCEVLESKPSKVRRKTFDLQLPADEYIDSEEGEVFHDEKVPPMLGFHSNGNKKFEIQGCVTANPGGKSDVKGAALRSDSCLWNRYGLANLNEPIQVEEANGSNFFDLPSARGSSNWEAQGPIVSSRKQEMFLSSSNEGGHATNRRAAFPNIFEAGRSKESEKPVTRGQMENFHVFSNPMQVPLNKFHEPPVFYVNDRSKVQQELDRPVSDLHLSKRSYEMSNTGDPGYLLASQTSRTYPIAPSLDVGKSWAHSGSSWEKPNGNGSQKSTSGHTQPCFKLSAAVHKSFPSSAQNNRIFGDRWHLSSDSRSNPGSGCDTPYQNGLYLGSTSGSNGGVLASTVRHDHAANYYKGSGCVGTNSPKDINLNVMLSNSLSNEAGQQPNYRTREAEPNNEDHHNVLPWSRAVPASKNETINSSRLSMTAELNFGLSPKNQFSKRNEAEHGGKVECCPNIESNSRCSNIEPRTSEHGECRSNRKLLGFPFFEGPCISKNESFSVTSPSAPLPNPSENEVDDKRKTRVLDINLPCDPVFDSDNATTGALAVENRKDTKISTVRVHIDLNSCVSDEEASMRPLPLASSSAKEKVMVEIDLEAPALPETEDDIIAEEESVEKHHERRSQSPQHMAVDIQDDLMAVAAEAIVVISSCGHSCHLDDTVSNALEDSSSDPLNWFAEVVSTHGDDKHTKSDTVFRDKEGKDNGESSLKGIDYFEYMTLRLAEVGEEDYIPKPLVPENMEIEESGTNLLQNRSRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSAISPPPAVHSECNQPIQQLSNIEMVLEDGSLSGWGKTTRRPRRQRCPAGTLRLSL | 1042 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 8929176 | 8935244 | + | CmoCh04G017690.1 | Cmo04g01769 | 380744 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 849 | 868 | - | - | |
| Cmo04g01769 | 1042 | Pfam | Plant protein of unknown function (DUF863) | 141 | 1034 | IPR008581 | - | |
| Cmo04g01769 | 1042 | PANTHER | TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED | 6 | 1037 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 546 | 568 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 965 | 996 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 908 | 929 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 425 | 444 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 420 | 444 | - | - | |
| Cmo04g01769 | 1042 | MobiDBLite | consensus disorder prediction | 1020 | 1042 | - | - | |
| Cmo04g01769 | 1042 | PANTHER | - | 6 | 1037 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g01769 | Cmo18g01141 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g01593 | Cmo-Chr2:9185007 | Cmo04g01769 | Cmo-Chr4:8929176 | 1.08E-06 | dispersed | |
| Cmo04g01769 | Cmo-Chr4:8929176 | Cmo05g00461 | Cmo-Chr5:2154718 | 5.91E-160 | dispersed | |
| Cmo01g00850 | Cmo-Chr1:4520662 | Cmo04g01769 | Cmo-Chr4:8929176 | 6.94E-13 | wgd | |
| Cmo13g01140 | Cmo-Chr13:9231923 | Cmo04g01769 | Cmo-Chr4:8929176 | 1.50E-14 | wgd | |
| Cmo18g01141 | Cmo-Chr18:11672334 | Cmo04g01769 | Cmo-Chr4:8929176 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g01769 | - | - | bhj:120080916 | 1727.99 |