Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01782 ATGTCGTCCGCCGAGAAGGAAAGAGAAACGCAGGTCTACATGGCCAAGCTTTCTGAACAGGCTGAACGCTACGACGAAATGGTGGAGTGTATGAAACAAGTTGCTAAACTAGATGTTGAGCTAACCATGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTCGGCGAGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAGGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAAGGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAACCATCTCATTCCTTCTTCAACTTCTTCAGAAGCATCGGTCTTTTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAATTCAAAACAGATCAAGAAAGGAAGGAGGCAGCTGACCAGTCATTGAAAGGATACGAGACTGCATCGAGCACCGCAAATACTGAACTCCCGTCAACCCACCCAATCCGTCTTGGGCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAACTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGATAGTACCCTCATAATGCAGTTGCTGAGAGACAACCTTACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGAAAACGTCAAAGGTGAGGATTCCAAACCCGTAGTACCAGCCACCGAGGTAGCTTTCTTTCATGCGTGA 804 44.03 MSSAEKERETQVYMAKLSEQAERYDEMVECMKQVAKLDVELTMEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKGYRQKVEEELSKICTDILTIIDNHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKGEDSKPVVPATEVAFFHA 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8966872 8969150 + CmoCh04G017820.1 Cmo04g01782 380757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01782 267 PIRSF 14-3-3 2 248 IPR000308 -
Cmo04g01782 267 Gene3D - 1 250 IPR036815 -
Cmo04g01782 267 Coils Coil 196 216 - -
Cmo04g01782 267 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cmo04g01782 267 PANTHER BNAC03G57490D PROTEIN 4 256 - -
Cmo04g01782 267 SMART 1433_4 8 250 IPR023410 -
Cmo04g01782 267 Pfam 14-3-3 protein 14 236 IPR023410 -
Cmo04g01782 267 Coils Coil 14 34 - -
Cmo04g01782 267 PANTHER 14-3-3 PROTEIN 4 256 IPR000308 -
Cmo04g01782 267 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cmo04g01782 267 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cmo04g01782 267 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01782 Cmo-Chr4:8966872 Cmo05g00524 Cmo-Chr5:2530297 1.50E-147 dispersed
Cmo04g01782 Cmo-Chr4:8966872 Cmo12g00080 Cmo-Chr12:434239 9.23E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01782 - K06630 csv:101221275 473.781