Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01784 ATGGCTGTTTTCGCGTTCTTAGTGTTCTTCCTTGCCATAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGTAAGCCAGCAAGTCCTTCAAAAGGCAATAGACTACGCCTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCACCAATGGCGCTTGTTTTCAGCCCAACACCGTCAAAGATCACTGCAACTACGCCGTCAACAGCTATTTCCAGCGGAAGGGACAAGTCCAAGGAAGCTGCGACTTCGGCGGCGCCGCCACGCCCAGCGTTACCCTCACCGCCACCGTGCCCTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACAACACCGACGAGCCCCAGTGGAACTACGCCGACGATGACTCCACCGGGGATGCCGACGATGACTCCACCAGGGACGCCGTCGTCAACGAGTCCAGGAATGACGCCGTCGGTGTTCAACAACGGAATCAGCCCGAGTGGTAGCGGCGGTTTCAACGACGGTAGCGGCAGCGTGGGTTTCAGTGATAATAGGAACTTGTTTTTGGCTGTGGGCTCAACTCTGTGGTTAGCCGTAGTGTTTCTCTGGGGATGA 594 55.72 MAVFAFLVFFLAITGRSYANYCLCRDGVSQQVLQKAIDYACGAGADCSPILTNGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFGGAATPSVTLTATVPSGCVYPSSPSNAGTTPTSPSGTTPTMTPPGMPTMTPPGTPSSTSPGMTPSVFNNGISPSGSGGFNDGSGSVGFSDNRNLFLAVGSTLWLAVVFLWG 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8974978 8976550 + CmoCh04G017840.1 Cmo04g01784 380759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01784 197 PANTHER BETA-1,3 GLUCANASE 1 184 IPR044788 -
Cmo04g01784 197 MobiDBLite consensus disorder prediction 145 164 - -
Cmo04g01784 197 MobiDBLite consensus disorder prediction 109 164 - -
Cmo04g01784 197 Gene3D - 17 107 - -
Cmo04g01784 197 SMART X8_cls 20 106 IPR012946 -
Cmo04g01784 197 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 1 184 - -
Cmo04g01784 197 Pfam X8 domain 21 91 IPR012946 -
Cmo04g01784 197 MobiDBLite consensus disorder prediction 123 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01784 Cmo18g00599 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01784 Cmo-Chr4:8974978 Cmo12g00078 Cmo-Chr12:426069 5.83E-59 dispersed
Cmo11g00205 Cmo-Chr11:1011697 Cmo04g01784 Cmo-Chr4:8974978 4.12E-39 wgd
Cmo18g01130 Cmo-Chr18:11624009 Cmo04g01784 Cmo-Chr4:8974978 4.86E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01784 - - cmax:111482519 291.967