Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01788 ATGATAGCTTCTGGTGGCTGCTCTGTGTTGTCATTCCATTCTATGGAGGTCAGCTTCTCGCATGTCAGCATGTTGCTTATGTTCACAGTGGCTGTTGCGGTCCTCATGGCTTCATCAGGACATAGACATTGGAAAATCATTAGGGAAAGCTTGTTAAATCTCCATGGCTTTCGAGGATTTTTGTCGTCGGTGTCGCTTCCGGCGAGATTTAGCGGCAGTGAACAGCATATTGCAAGCCATATAGTCTCTAATTATATAGCTATTGAATTGTCTAAAGGAGCAAAAGCTGCATTCATGGATCTATTGGTGGAAGTGGGAGAAAGCTTGAAACTATTGAAGAAGGCGAGAACAATAGAATATATGGCAGCGACGGGTAGATGTGAAGATACCGCTGGGGAAGGATTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGAGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGTTGGAATTATCAGATCTCGTTCAAGTTGGCGAAAATGTTAACCGACCCGAAGCAGGCACAATTTTCTTGGGAAATCCCGATCATGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCATTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACATCTGCATCTCAAGTTTATGATATTACCCATGAGTCTGGTGGAAATGCTATGTCTCCAACCCAATCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAATCATATGATCCGTCAAGAATTCCGTCTGCAGTTTTCCAAAGAAGTAGATCAACCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCATGGTGGAGATGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGCTTGTGTTTAACTCACCACCTGAAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATACGAAGAGGAGCCTAAAGTGGCAGATAGCACAGAATATAACATTGAGGATAAAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAATTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGTGGCTCAGGATGGATCTTCTCTACAAAATCTAATGCAAACTCTTGGTTTCCCTGCTGTTCATGTTCTTGTTACAAATGGAATTGCTATTCACGTTCTTGTTGCAAATGGACTTGCTGTTCATGTTCGTCTTGTTGCACATGGAACTGCTATAGTTGTAATTTTCGTCCTCACTGTCATTTTTGTCCTCGATGCCGTATTTTCTACCCTTGCCATTTTTGTCGTGGTTAAGTGGACAATGTCGCAGAAAAGACAA 1470 43.06 MIASGGCSVLSFHSMEVSFSHVSMLLMFTVAVAVLMASSGHRHWKIIRESLLNLHGFRGFLSSVSLPARFSGSEQHIASHIVSNYIAIELSKGAKAAFMDLLVEVGESLKLLKKARTIEYMAATGRCEDTAGEGLGSTHSEDTAGEGFSLSPTEQLAYGSSSCINLLELSDLVQVGENVNRPEAGTIFLGNPDHDVYQLQFKDDESDVSSICSAKSEKSSGSQGPTSASQVYDITHESGGNAMSPTQSPPLQTMDRVGGYESYDPSRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSPPEVITSRETEMKSVEYEEEPKVADSTEYNIEDKEGLVAEDLSGRNVLPPALSSNSSSRSRHSERSQCSSNSFAFPILADEVAQDGSSLQNLMQTLGFPAVHVLVTNGIAIHVLVANGLAVHVRLVAHGTAIVVIFVLTVIFVLDAVFSTLAIFVVVKWTMSQKRQ 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8988809 8992379 + CmoCh04G017880.1 Cmo04g01788 380763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01788 490 PANTHER - 134 411 - -
Cmo04g01788 490 MobiDBLite consensus disorder prediction 131 151 - -
Cmo04g01788 490 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 134 411 - -
Cmo04g01788 490 MobiDBLite consensus disorder prediction 210 229 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01788 Cmo18g01125 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01788 Cmo-Chr4:8988809 Cmo10g00317 Cmo-Chr10:1421901 4.99E-14 dispersed
Cmo15g00242 Cmo-Chr15:1196815 Cmo04g01788 Cmo-Chr4:8988809 1.97E-11 wgd
Cmo18g01125 Cmo-Chr18:11605507 Cmo04g01788 Cmo-Chr4:8988809 1.54E-07 wgd
Cmo04g01788 Cmo-Chr4:8988809 Cmo04g02932 Cmo-Chr4:20770420 5.81E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01788 - - cmos:111458373 550.821