Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01790 ATGTGTGGAATCGCTTTGGTCGTTTCTGGCTGTCGCCTTGATTTATCGTCTCTACATGTAGACGCCAGAGCTCCGTCTCCTCATCCAGTGCACGAGCATCTCGAGTTTTCGATAGATGATCTTAAAGCGGCATTGCGGAGAAGGGGCCCCGATAGCTTAGGCGAAGTGAAGGTTTTTATTTCCTCAATATGTTCCAATCCTGGTGAAGAGCAGCAGTTTGAGTGTTTCGTTGAGAGGGTTGATTGTGGAGTTGCATTTCAGAATCAAAATGATCAACACGAGATGGCAAATGGAAGGATTCTCCAATCACATGCCAGTTGTAGTAGTCCCATCTCTGGTGCGCAGTTTTGTTTTCTGGGCGCTACATTACAGCTTAGAGGGCTTAACCCTATTGTTCAGCCACTGATGGATGCTTCCCGCAATGTTCTTGTTTACAATGGTGAAATATTTGGAGGAATACACGTTGAGTATCATCAAAATGATGCTGAAGCTCTTATGCAAGCTCTTGGGAATTGTTGCGCAAGTAATGTTAGTTTAGATACGAACACATGTGTAGGGGAATGTAAGAGAGAAAGCACTATTGTAGACGTTCTTTCAAACATTCAAGGGCCATGGGCAATTATCTACTTCGCGGATAGTGCAAAAACTTTGTGGTTTGGTAGGGATGCCTTTGGTAGGCGAAGTCTTCTTGTTCACTGGCCAACCGTGGAGGATTCTCGGTTTCTTTTGTCTTCTGTATCACCAGCTTCCTCCATGTTTCACGACTCTGGACATGACAATGATAATGGTACTTGTGAAGTGAGCTTCTGGGAAGAACTTCCATGTGGGATTTACAGCATCTCTTTTGATGCTCGGAGCACGGACGGTTGCCTGGTTGGTGAAGTCAAAAGGCATGAATGGACCAATGAGTCACTGAAAGAACTTATCGAGTGGAAGAGAACTTGTATTGTACCTAAACCCGGAGACATCTCCTCTTCATATCACGAGGATCTTTTGTCACAGCATGAAAGTAATTCAGCATGTTTGCATAACTTGCAATCAGTATCAGAGGGTATCCAAGCTCCTGTTTCAACACCTGCGGAGATTCTGCTGGATGCTCTACGGAAGTCTCTTATCAGGCGTACTTCACTTTATACAATTTTCCAGGGTACAACATCTGCTTCCAGAAAAGCAGAACTTGGTCCTGTGGCCATTCTTTTTTCCGGTGGATTGGATTCTATGATACTAGCAGCATTACTGGACGAGTGCCTTGATGCCTGTTATGAGATAGATCTTCTTAATGTCAGCTTTGATGGATGTTCTGCACCTGATCGAATCTCAGCAAAGGCTGGAGACCTGAATATTGGAATAGCTTTGTGGCTGGCCTCTGGTGGTGATGGTTGGATTTATGAATCAATCGACAAGGATGATAAGTTTCATCGACGTGTAAAATATAAGTCTCAGGCCAAGATTCTCCTTGTTGGTTCTGGTGCCGATGAGCAATGTGCTGGTTATGGTAGGCATCGAACAAAATATAGACAAGGGGGCTGGCATCTTTTAAATGAGGAAATGAAGTTGGATATTCAGAGAATCTGGAAGAGAAATCTTGGGAGAGATGACAGATGTATTGCAGATAATGGGAAGGAGGCTAGATTTCCCTTTCTGGATGAAGACGTTATACATACATTGCTAGCATTTCCTCTATGGGAGGTTACCAACCTCGAGAAACCTGCTGGAACCGGTGATAAGAAGATACTTAGGGAGGTTGCGAAATTGCTCGGTCTGCACGAAGCAGGAGCTCTACCTAAAAGAGCAATACAGCACATCCGCCCTCTCTTCCTTCCAACATCTGAAGAAAAACAGAAGGAATACAGAAGCGCGCAGCAGTGCTGGCTCTGTGTGAAGGAAATTTTCGGCAGCATGTGGAACTGGAGGAACGGCAATGGAATGAAGAAACGGAAAATGATCGCGCTGGAATAG 1959 44.67 MCGIALVVSGCRLDLSSLHVDARAPSPHPVHEHLEFSIDDLKAALRRRGPDSLGEVKVFISSICSNPGEEQQFECFVERVDCGVAFQNQNDQHEMANGRILQSHASCSSPISGAQFCFLGATLQLRGLNPIVQPLMDASRNVLVYNGEIFGGIHVEYHQNDAEALMQALGNCCASNVSLDTNTCVGECKRESTIVDVLSNIQGPWAIIYFADSAKTLWFGRDAFGRRSLLVHWPTVEDSRFLLSSVSPASSMFHDSGHDNDNGTCEVSFWEELPCGIYSISFDARSTDGCLVGEVKRHEWTNESLKELIEWKRTCIVPKPGDISSSYHEDLLSQHESNSACLHNLQSVSEGIQAPVSTPAEILLDALRKSLIRRTSLYTIFQGTTSASRKAELGPVAILFSGGLDSMILAALLDECLDACYEIDLLNVSFDGCSAPDRISAKAGDLNIGIALWLASGGDGWIYESIDKDDKFHRRVKYKSQAKILLVGSGADEQCAGYGRHRTKYRQGGWHLLNEEMKLDIQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIHTLLAFPLWEVTNLEKPAGTGDKKILREVAKLLGLHEAGALPKRAIQHIRPLFLPTSEEKQKEYRSAQQCWLCVKEIFGSMWNWRNGNGMKKRKMIALE 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8996915 9003756 + CmoCh04G017900.1 Cmo04g01790 380765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01790 652 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 390 593 - -
Cmo04g01790 652 CDD Asn_Synthase_B_C 394 601 IPR001962 GO:0004066|GO:0006529
Cmo04g01790 652 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 444 - -
Cmo04g01790 652 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 445 632 - -
Cmo04g01790 652 Pfam Asparagine synthase 508 585 IPR001962 GO:0004066|GO:0006529
Cmo04g01790 652 Gene3D HUPs 376 628 IPR014729 -
Cmo04g01790 652 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 29 265 IPR029055 -
Cmo04g01790 652 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 41 249 IPR029055 -
Cmo04g01790 652 Pfam Glutamine amidotransferase domain 133 245 IPR017932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01790 - - bhj:120081619 1029.62