Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01793 ATGGCTCTATGTGGGGATCATAAAGATAGAGAGCTAAGGATCCATGAAAGTTTGGAAGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCGGTGAAAGAACGTGGGGTGTTTTCTATAGCGTTGTCTGGTGGTTCACTCATTAGCTTAATGGGGAAGCTGTGTGAAGCTCCTTACAACAAGACTGTGGACTGGGGCAAGTGGTATATATTTTGGGCTGATGAGCGTGTTGTTGCAAAAAGCCATGCCGACAGCAATTATAAGCTTGCTAAGGATAACCTTCTTTCTAAGGTGCCAATTGTTCCGAGCCATGTACACTCGATCAATGATTCGGTGTCAGCTGAGGAAGCTGCCGATGAGTACAAGTTTGTCATTCGACAGTCAGTAAAATCCCGCATAGTAAGTGTGTCTGATGTGAGTGACAGCCCCAAGTTTGACCTCATACTACTTGGAATGGGTGCTGATGGCCATGTTGCCTCATTATTTCCCGATCACTCGGTGCTCGAAGAGAAAGATGAATGGGTTGCCTTCATTACCAATTCTCCAAAACCTCCTCCAGAGAGAATCACCTTCACGTTCCCTGTGATCAACTCTGCATCAAACGTGGCCATTGTCGTGACAGGTGAAAACAAAGCAGAGACAGTACATTTGGCCATCGATGATGTAGGAGACGACTCCCCGCTCCTACCTGCAAGGTTGATACAGCCAAGAAAAGGAAAGTTGACATGGTTTTTGGATAAGTATGCCGCTTCGAAACTTGACAATTACCAATTTTCGGAGTAG 798 45.11 MALCGDHKDRELRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSLISLMGKLCEAPYNKTVDWGKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVIRQSVKSRIVSVSDVSDSPKFDLILLGMGADGHVASLFPDHSVLEEKDEWVAFITNSPKPPPERITFTFPVINSASNVAIVVTGENKAETVHLAIDDVGDDSPLLPARLIQPRKGKLTWFLDKYAASKLDNYQFSE 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9019060 9022587 + CmoCh04G017930.1 Cmo04g01793 380768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01793 265 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 248 IPR006148 GO:0005975
Cmo04g01793 265 SUPERFAMILY NagB/RpiA/CoA transferase-like 11 260 IPR037171 -
Cmo04g01793 265 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 265 - -
Cmo04g01793 265 TIGRFAM pgl: 6-phosphogluconolactonase 14 258 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cmo04g01793 265 Coils Coil 18 38 - -
Cmo04g01793 265 Gene3D - 8 261 - -
Cmo04g01793 265 CDD 6PGL 19 250 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cmo04g01793 265 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 265 IPR039104 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01793 Cmo18g01121 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01793 Cmo-Chr4:9019060 Cmo15g01070 Cmo-Chr15:6956983 3.64E-95 dispersed
Cmo18g01121 Cmo-Chr18:11575300 Cmo04g01793 Cmo-Chr4:9019060 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01793 K01057 - csv:101210739 478.789