Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g01798 | ATGGGGAAAACTGGAACCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAATTGGACTCTGTTTCTGTGAAAACCGGACCGAAGAAGGCTGATGATTGTGTAGAGGGTGGTGAGGTTGGAGCTAAACCAGGGCTGGGAAATGGAAGGAAGATCATGATTGTGGTTGACTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCTCTGTCTCACACTGTGCAGAATCAAGACAAGATTGTTCTACTTCATGTTATCAAGCCTTCAAGAAAGGGGGAAGGACTAAGCAAGGAGACATCACCAAGAGCATATGAATTGGTTCATTCCATGAGAAATTTATGTCAATTGAAGAGACCAGAGGTGGAAGTCGAAGTTGCAGTGGTGGAAGGAGGGAAAGAGAAAGGGTCGGTGATTGTGGAAGAAGCGAGAAAGCAAGAGGCATCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCCACGACATGGCGGCTTCTGATGGTGTGGGCTGGACACCGATGGGGGGGCGGCGGCGGCGGCGGCGGTGGCGGTGGAGTAGTGGAGTATTGCATACAGAATGCGAGCTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGGTATTTGATCACGACAAAGCGACAAAAGGATTTCTGGCTTTTGGCTTAA | 699 | 49.93 | MGKTGTKLPSFCLNRIRPHVRVPIQSKLDSVSVKTGPKKADDCVEGGEVGAKPGLGNGRKIMIVVDSTIEAEGALQWALSHTVQNQDKIVLLHVIKPSRKGEGLSKETSPRAYELVHSMRNLCQLKRPEVEVEVAVVEGGKEKGSVIVEEARKQEASLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 9043364 | 9044646 | + | CmoCh04G017980.1 | Cmo04g01798 | 380773 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g01798 | 232 | Gene3D | HUPs | 58 | 216 | IPR014729 | - | |
| Cmo04g01798 | 232 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 59 | 212 | - | - | |
| Cmo04g01798 | 232 | CDD | USP_Like | 60 | 208 | - | - | |
| Cmo04g01798 | 232 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 232 | - | - | |
| Cmo04g01798 | 232 | Pfam | Universal stress protein family | 59 | 209 | IPR006016 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g01798 | Cmo18g01113 | CST | |
| Cmo04g01798 | Cmo18g01118 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g01446 | Cmo-Chr1:11280239 | Cmo04g01798 | Cmo-Chr4:9043364 | 4.84E-25 | dispersed | |
| Cmo04g01798 | Cmo-Chr4:9043364 | Cmo09g00791 | Cmo-Chr9:4043178 | 6.30E-36 | dispersed | |
| Cmo15g00695 | Cmo-Chr15:3397124 | Cmo04g01798 | Cmo-Chr4:9043364 | 3.05E-07 | dispersed | |
| Cmo13g01084 | Cmo-Chr13:8971326 | Cmo04g01798 | Cmo-Chr4:9043364 | 2.40E-09 | transposed | |
| Cmo11g00227 | Cmo-Chr11:1122330 | Cmo04g01798 | Cmo-Chr4:9043364 | 1.15E-38 | wgd | |
| Cmo13g01102 | Cmo-Chr13:9047873 | Cmo04g01798 | Cmo-Chr4:9043364 | 2.62E-57 | wgd | |
| Cmo18g01118 | Cmo-Chr18:11556233 | Cmo04g01798 | Cmo-Chr4:9043364 | 1.57E-98 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g01798 | - | - | cmos:111458216 | 429.483 |