Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01802 ATGGATCTAGAAAGTGGAGTTCCTACTGAAAAGAATACGAAGAAAGATTCATGGAAGACGGTTCTGATGATGGCTTATCAGAGTCTTGGGGTTGTCTATGGGGAGTTGGGCACTTCGCCTCTATATGTATATAGGAACACTTTTGCAGAAGAAGATATCGATCATACTCAGAGCAACGACGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTTACCATTGTTCCTTTGCTTAAGTACATATTTATTGTCCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCTCTGTATTCGTTACTATGTCGACACGCACGAGTTAGCTCCTTGCCCAATACCCAATTGGCTGATTCTGAACTCACTGAGTACAAGATGAATGTTCTTGGTCCGCCATCTCTGGAAAGCTTTGGATTCAAACTCAAATCCGCATTAGAAAAGCGTCGTGTTCTTCAAAAGTTCTTGCTCGTTCTTGCTTTAATTGGGACTTGCATGGTGATTGGAGATGGCATCCTAACACCGGCTATTTCTGTTCTTTCGGCCGTTTCTGGTCTCGAGCATACCATGGCGAAAGAGCATCACCAATATATAGTACTCCCGATTGCGTGCATCGTACTAATATGCTTGTTCGCTCTTCAACACTACGGCACGCACAAGATCGGGTTCTTGTTTGCTCCCATAGTTACAGTTTGGCTATTGTGTATCAGTGCCATTGGGTTGTACAATATTATTCACTGGAATCCAGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTACAATTTCTCAAGAAAACCCAGAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGCTCGGAGGCGATGTTTGCTGACCTTGGGCATTTTTCACAGTTGTCAATCAAGATCGCTTTCACTTTAATGGTTTATCCGTCTCTCCTCCTTGCATACATGGGGCAAGCTGCCTATCTGTCTCAACATCATCCCTCTCCAAATGATCATCTAATTGGGTTTTATGTATCTGTGCCTGATAAATTGAGGTGGCCTGTCCTTATAATTGCTGTGCTTTCTGCAGTAGTAGGCAGCCAGGCTATAATCACCGGAACGTTTTCTATTATAAAGCAGTGCTCGGCTTTGGGTTGTTTTCCTCGAGTCAAAATCATCCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCGGAGGTTAATTGGATTCTGATGCTTTTGTGCTTGGCTGTTACCATAGGTTTCAGAGACACCAAGCGTTTGGGCCACGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACGTGCTTGATGTCGCTTGTTATCGTTCTGTGCTGGCACCGAAGTGTATTTCTTGCTATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCTGCTTCTCTTACAAAGTTTCTTGAAGGAGCCTGGGTTCCCATTGCAATTTCTATTGTATTCCTCATAGTCATGTATGTCTGGCACTATGGTACTCTAAGGAAGTTTGAATTTGAGCTCCAAAACAAGGTTTCTGTCAACTGGCTACTCGGCGTCGGTCCCAGCTTAGGCATTGTGAGAGTCCGTGGGATCGGTGTCGTACAGACTGAGCTAGTTTCAGGAATCCCGGGTATCTTCACCCACTTTGTCACCAACATTCCCGCCTTCCATCAAGTCCTTGTGTTCCTTTGCATCAAGTATGTCCCAGTGCCACACGTTAGACCAGAGGAACGGTTTCTTATTGGTCGTATCGGTACGAGTGAATACAGACTCTATAGGTGCATTGTGCGATACGGGTATCGAGATTTTCACAAAGACGACGTAGAGTTCGAGAGTGATCTTCTATGCAGCATAGCAAAGTTTATAAGGTCAGGAACTGCAGAGGCAGGTGATGAAAAGATGTCAATGGTTGGGACATCATCTTCTACACACGAAGATAGAATTCAGATGGCCGTGGCCGAGACCGGTAACGACGAAGACTCTGAAGAACTGTACCGAGGTTCAGATACAAGGGAAATAAGGTCACCCGGTCCAGTTGAATTGAGAAAAAGAGTGCGGTTCATGTTACCCGAGAGCCCGAAAATGAACACGAATGCAATGGAAGAATTAGAAGAGCTAATGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCACACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCGTTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTGAGTTCCCTGCAGGTTTATCGCATTCATCATCAACCCTTGAGGTGGGCATGATGTATCTTGTTTAG 2334 44.47 MDLESGVPTEKNTKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYRNTFAEEDIDHTQSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSLESFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYIVLPIACIVLICLFALQHYGTHKIGFLFAPIVTVWLLCISAIGLYNIIHWNPGVYRAISPRYMLQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTLMVYPSLLLAYMGQAAYLSQHHPSPNDHLIGFYVSVPDKLRWPVLIIAVLSAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTIGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLTKFLEGAWVPIAISIVFLIVMYVWHYGTLRKFEFELQNKVSVNWLLGVGPSLGIVRVRGIGVVQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIGTSEYRLYRCIVRYGYRDFHKDDVEFESDLLCSIAKFIRSGTAEAGDEKMSMVGTSSSTHEDRIQMAVAETGNDEDSEELYRGSDTREIRSPGPVELRKRVRFMLPESPKMNTNAMEELEELMEAREGGVAYILGRSHMKAKQGSSMLKRVSIDFVYEFLRKNSREAEFPAGLSHSSSTLEVGMMYLV 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9073552 9078843 - CmoCh04G018020.1 Cmo04g01802 380777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01802 777 TIGRFAM kup: potassium uptake protein 24 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g01802 777 MobiDBLite consensus disorder prediction 660 680 - -
Cmo04g01802 777 Pfam K+ potassium transporter 26 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g01802 777 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g01802 777 PANTHER POTASSIUM TRANSPORTER 6 1 776 - -
Cmo04g01802 777 MobiDBLite consensus disorder prediction 664 680 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01802 Cmo-Chr4:9073552 Cmo14g00647 Cmo-Chr14:3259642 0 dispersed
Cmo04g00296 Cmo-Chr4:1471607 Cmo04g01802 Cmo-Chr4:9073552 0 transposed
Cmo04g01802 Cmo-Chr4:9073552 Cmo05g00002 Cmo-Chr5:4477 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01802 K03549 - csv:101212925 1408.66