Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01836 ATGGCGGTTCAAGGCGGAGCACCGGCCGCTCAGCCCAGGAAGTTCTCTCTTCCGGTGGACTCCGAACACAAATCCACCAAATTCAATATATTCTCCGTCGCAGCTCCCCACATGCGAACGTTTCACCTATCCTGGATTTCGTTCTGCGCGTGTTTTGTCTCCAGTTTTGCGGCAGCTCCTCTGCTTCCGGTGATCCGCGACAATCTTAATTTAACCGACACTGACATTGGGAACGCCGGAATTGCCTCCGTCTCCGGCGCTGTCTTTGCCCGTATCATGATGGGTTCCGCCTGTGATTTAGTCGGACCACGTCTCGCCTCTGCCTCACTCATCCTCATAACCTCGCCGGCTGTTTATTTAACCTCCATAGCCTCATCCCCTGCTTCGTTTTTCCTCGTTCGATTCTTCACTGGATTCTCTCTCGCCACATTCGTCTCGACCCAATTCTGGATGAGCTCAATGTTCTCCTCCACCGTCGTCGGCACCGCCAACGGCGTAGCCGGCGGTTGGGGGAACTTAGGCGGCGGCGCAACACAGCTGATTATGCCGTACGTGTTCGCCATCATCGAGCAAATCGGCGCAACGAAATTCACCGCGTGGAGAATCGCTTTCTTCATCCCAGCGATTTTCCAAACGCTTTCGGCTTTCGCGGTTCTGATGCTCGGCGAGGACACGCCGGACGGGAACTTCGGGGAGCTGCAGAAAACAGGGGAGAAGGCAAAAGACAAATTTTCAACGGTGGTGTACAATGGGGCGAAGAATTACAGGGGATGGATTTTGGCATTGACTTATGGGTACTGTTTTGGGGTGGAATTAACGATTGACAATATAATAGCGAATTATTTCTACGATAGGTTCAATTTGAACCTGCACACGGCAGGGATCATAGCGGCGAGCTTTGGGCTGGCTAACCTTTTTTCGAGGCCGTACGGAGGGATACTGTCGGACGTGGTGGCGAAGAGGTACGGGATGAGGGGGAGGCTGTGGGCTCTGTGGTTGGTGCAGACATTGGGCGGAGTTTTCTGTGTGATTCTTGGATTGGTTCAGTCTTTGAGTGTTTCCATTGCCATTATGATTATTTTCTCTCTCTTTGTTCAAGCTGCGTGTGGACTTACATTTGGTGTCGTTCCTTTCATCTCCAGAAGGTCGTTGGGGGTAATATCGGGGATGACAGGAGCGGGGGGGAACGTGGGGTCGGTACTGACTCAGTTGATATTCTTCAGAGGGTCAAGATACAGCAAAGAGAAGGGGATAAGTCTGATGGGAGTTATGATAATAGGGTGCACTCTTCCAATAGTGTTAATATATTTCCCACAGTGGGGCAGCATGCTGACCGGACCAGCTTCCTCCAAGATAGCTTCCGAGGAGGAGTATTACTTGTCGGAGTGGACCCCTGAGGAGAAGGCCAAAGGCTACCATTTGGCTGCCCTCAAGTTTGCTGATAACAGCCGAACTGAAAGAGGCAAAAGCCTCAGTAAGGGCACTGCTGATGCTGCCTCTGCCTCGGCTTCGCCTCACGTCTGA 1524 52.23 MAVQGGAPAAQPRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFVSSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITSPAVYLTSIASSPASFFLVRFFTGFSLATFVSTQFWMSSMFSSTVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEQIGATKFTAWRIAFFIPAIFQTLSAFAVLMLGEDTPDGNFGELQKTGEKAKDKFSTVVYNGAKNYRGWILALTYGYCFGVELTIDNIIANYFYDRFNLNLHTAGIIAASFGLANLFSRPYGGILSDVVAKRYGMRGRLWALWLVQTLGGVFCVILGLVQSLSVSIAIMIIFSLFVQAACGLTFGVVPFISRRSLGVISGMTGAGGNVGSVLTQLIFFRGSRYSKEKGISLMGVMIIGCTLPIVLIYFPQWGSMLTGPASSKIASEEEYYLSEWTPEEKAKGYHLAALKFADNSRTERGKSLSKGTADAASASASPHV 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9226493 9228718 - CmoCh04G018360.1 Cmo04g01836 380811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01836 507 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112
Cmo04g01836 507 SUPERFAMILY MFS general substrate transporter 35 437 IPR036259 -
Cmo04g01836 507 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 9 491 - -
Cmo04g01836 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 491 IPR044772 GO:0015112
Cmo04g01836 507 MobiDBLite consensus disorder prediction 483 507 - -
Cmo04g01836 507 Gene3D MFS general substrate transporter like domains 240 442 IPR036259 -
Cmo04g01836 507 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857|GO:0055085
Cmo04g01836 507 Gene3D MFS general substrate transporter like domains 34 229 IPR036259 -
Cmo04g01836 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 439 IPR020846 GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01836 Cmo-Chr4:9226493 Cmo13g00232 Cmo-Chr13:1828434 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01836 K02575 - csv:101212365 864.759