Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01871 ATGCTCCTCCAATTGGGCTCTGTTCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAGAGAGTTGTTTAAGTTCCATGATCTTGCTTCTTGCAGCCGCCCTCACTTAACGGGTAGTGGAAGATTTTCCTACAACTTCGTGGACCTAAATCTCTCCCCGTATGGTGAACGTTGGAGGGAACTTCGGAAGATTTGTATGCTTCAGCTCTTCACTGCTCGGCGGGTCCAATCTTTTCAGGAAATTAGAGAAGAGGAAGTGGGTCGGCTTGTAAACTCCATCTCTCAATCCTCTTCTTCTTCAGCTCCAATCGATTTGAGTAAGAAATCGTATTCTCTCACTGCAAATGTAACAACAAGAGTTGCTTTTGGGAGCATCTTCAGCGGGGGGAAATTAGATAATGAAAATTTTCAACATGTTATGAGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCCATGACCGATTTCATTCCCACTTTCGGTTGGATTATTGATCGGTTGACTGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGGTGAGATGGATGCCTTTTTTCAACATGTGGTCGACAATCGCATCAACTTCAAGAAGACTTCTAAAAGTGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGCACTAAAAGTCACCCAAGATTGCGTTAAAGCACTTATTATGGATATTTTTCTAGCCGGAGTAGAAACAGGGACAACCACCATTGTTTGGACCATGACGGAGCTAGTTAAGAACCCAAGAGTGATGAAGAAACTCCAAGACGAGATTAGAAATTGCATAAAAGAAGATTTAGTGAAAGAGATCGACTTGGAAAAGCTCGAGTATCTAAAAATGGTAGTGAAAGAGTCATTGAGATTGCATCCACCCGTCCCACTTCTACTTCCAAGAGAAACCATCTCCCCTTTTAAGCTCAATGGTTATGATATCGACCCTAAGGCTCATCTTCACATTAACGTGTGGGCCATTGGACGAGACCCACAATCTTGGACTAACCCAGAAGAGTTCTTTCCGGAGAGGTTTATAGGAAGTAATATCGATTATAAAGGACAGAACTTCGAGTTAATACCTTTCGGAAGTGGCCGAAGAATTTGTGCTGGGATAAATATGGCAACCATTACGGTGGAGTTGGCACTGGCTAACCTGTTGCTGGGTTTTGATTGGAAACTTCCGAATGGAATGAAAGAAGAAGATGTTGATACGGAAGAGGCTGCTGGTCTTGGGGCGGCCAAGAAATCACCCCTTATGCTTATTCCAGTCCCTTACTTTTAG 1305 43.6 MLLQLGSVPTIVISSAAAARELFKFHDLASCSRPHLTGSGRFSYNFVDLNLSPYGERWRELRKICMLQLFTARRVQSFQEIREEEVGRLVNSISQSSSSSAPIDLSKKSYSLTANVTTRVAFGSIFSGGKLDNENFQHVMRRAVAAIGSFSMTDFIPTFGWIIDRLTGVHGRLEKSFGEMDAFFQHVVDNRINFKKTSKSEENIVDVLLRMERESSESDALKVTQDCVKALIMDIFLAGVETGTTTIVWTMTELVKNPRVMKKLQDEIRNCIKEDLVKEIDLEKLEYLKMVVKESLRLHPPVPLLLPRETISPFKLNGYDIDPKAHLHINVWAIGRDPQSWTNPEEFFPERFIGSNIDYKGQNFELIPFGSGRRICAGINMATITVELALANLLLGFDWKLPNGMKEEDVDTEEAAGLGAAKKSPLMLIPVPYF 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9396331 9397738 - CmoCh04G018710.1 Cmo04g01871 380846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01871 434 Pfam Cytochrome P450 3 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Cmo04g01871 434 PANTHER CYTOCHROME P450 71B16-RELATED 1 432 - -
Cmo04g01871 434 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 247 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PANTHER CYTOCHROME P450 71B11-RELATED 1 432 - -
Cmo04g01871 434 SUPERFAMILY Cytochrome P450 2 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS P450 superfamily signature 238 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01871 434 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01871 Cmo-Chr4:9396331 Cmo04g01878 Cmo-Chr4:9497654 0 dispersed
Cmo04g01871 Cmo-Chr4:9396331 Cmo04g01872 Cmo-Chr4:9421758 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01871 - - cpep:111810187 749.969