Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01872 ATGCTCCTCCAATTGGGCTCTGTACCAACCATCGTTATCTCCTCTGCCGCTGCGGCAAGAGAGTTGTTTAAATTTCACGACCTTGCTTCTTGCAGCCGTCCTCGCTTAGCAGGTAGTGGAAGACTTTCGTACAACTACCTTGACATTAGTTTCTCTCCATACGGAGATCACTGGAGGAACGTTCGAAAGATTTGTATGCTCGAGCTCTTCACTTCTCGGCGGGTGGAATCTTTTCGGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTCTAAACTCCATCTCTCAATCCTCTTCTTCTTCAGCTCCAATTGATCTGAGTGAGAAATCCTATTCTCTCACTGCAAATATAATAACAAGAGTTGCTTTCGGAAGCATCTTCAGCGGAGGAAAATTAGATGATGAACACTTTCAACATGTTATGCATAGTGCATTAGCAGCAATTGGAAGCTTCTCGATGACCGATTTCATTCCTACATTCGGTTGGATTATTGATCGGTTGAATGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGCTGAAATGGATGCCTTTTTTCAACATGTAGTCGAGGATCGTATCAACTTCAAGAAGAGTTCTAAGAAGGAAGAAAACATTGTTGATGTTTTGCTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGCATTAAAAGTCACCAAAGATTGCGTTAAAGCACTCATTATGGATATTTTTCTAGCTGGAGTAGAAACTGGAGCAGGCACCATTGTTTGGGCCATGACAGAGTTGGTTAGGAACCCAAGGGTGATGAAGAAGCTCCAACACGAGATCAGAAGTTGCATAAAAGAAGGTTCAGTGAAAGAGATCAATCTAGAAAAGCTCGAGTATCTAAAAATGGTAGTGAAAGAGGTTTTGAGATTGCATCCACCAGTCCCACTTCTACTTCCAAGAGAAACCATTTGCCCTTTTAAGCTCAACGGTTATGATATCGACCCCAAGTCTCATCTTCACATTAATGTGTGGGCCATTGGACGAGACCCACAATCCTGGACTGACCCAGAAGAGTTCTTTCCTGAGAGGTTTATAGAAAGCAATGTCGATTACAAAGGACAAAACTTCGAGTTAATACCTTTTGGAGGCGGGCGAAGAATATGTCCTGGAATAAACATGGGTACCCTTACGGTAGAGTTGGCATTGGCTAACCTCTTCCTGTGCTTTGATTGGAAACTCCCAAATGGAATGAAGGAAGAAGATATAGATATGGAAGAGGAAGTTGGTCTTACCATTACCAAGAAATCACCCCTTAAGCTTATTCCTTTAAAATCGTTGACAAAAAATAATCTCTAG 1320 42.5 MLLQLGSVPTIVISSAAAARELFKFHDLASCSRPRLAGSGRLSYNYLDISFSPYGDHWRNVRKICMLELFTSRRVESFREIREEEVGRLLNSISQSSSSSAPIDLSEKSYSLTANIITRVAFGSIFSGGKLDDEHFQHVMHSALAAIGSFSMTDFIPTFGWIIDRLNGVHGRLEKSFAEMDAFFQHVVEDRINFKKSSKKEENIVDVLLRMERESSESDALKVTKDCVKALIMDIFLAGVETGAGTIVWAMTELVRNPRVMKKLQHEIRSCIKEGSVKEINLEKLEYLKMVVKEVLRLHPPVPLLLPRETICPFKLNGYDIDPKSHLHINVWAIGRDPQSWTDPEEFFPERFIESNVDYKGQNFELIPFGGGRRICPGINMGTLTVELALANLFLCFDWKLPNGMKEEDIDMEEEVGLTITKKSPLKLIPLKSLTKNNL 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9421758 9426566 - CmoCh04G018720.1 Cmo04g01872 380847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01872 439 PANTHER CYTOCHROME P450 71B11-RELATED 1 432 - -
Cmo04g01872 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Cmo04g01872 439 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 247 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS P450 superfamily signature 238 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 PANTHER CYTOCHROME P450 71B16-RELATED 1 432 - -
Cmo04g01872 439 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 SUPERFAMILY Cytochrome P450 2 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01872 439 Pfam Cytochrome P450 3 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01872 Cmo-Chr4:9421758 Cmo04g01877 Cmo-Chr4:9459183 0 dispersed
Cmo04g01871 Cmo-Chr4:9396331 Cmo04g01872 Cmo-Chr4:9421758 0 tandem
Cmo18g00753 Cmo-Chr18:9190173 Cmo04g01872 Cmo-Chr4:9421758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01872 - - cmos:111458142 727.243