Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01874 ATGATGTCTAATAATCTTATCATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTATTGCTTCTTAAAACCATAAGAAAACACTCAAACCCCAAAAACAAGCTTCTTCCTCCAAGCCCTCTAAAGCTTCCTTTGTTGGGTCATTTGCACCTCCTTGGCTCCCTCCCTCATCGCTCTCTCTCTAAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTCCAACTGGGCTCTGTCCCAACCATCGTGATCTCCTCTGCCGCCGCTGCAAGAGAGTTGTTTAAGTTCCATGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGTAGTGGAAGATTTTCATACAACTTCTTGGACCTAAATCTCTCCCCGTACGGTGAACGTTGGAGGGAACTTCGGAAGATTTGTATGCACGAGCTCTTCACTGCTCGACGGGTTCAATCTTTTTGGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTGTAAAATCCATCTCTCAATCCTCTTCTTCTTCAGCTTCAATCAATCTGAGTGAGAAATCCTATTCTCTCACTGCAAATATAACAACAAGAGTTGCTTTTGGGAGCATCTTCAGCGGGGGAAAATTAGATGATGAACACTTTCAACATGTTATCCGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCCATGACCGATTTCATTCCTACTTTCGGTTGGATTATTGATCGGTTGACTGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGGTGAGATGGATGCCTTTTTTCAACATGTAGTCGACGATCGTATCAACTTCAAGAAGAGTTCTAAGAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGTACTACAAGTTACCCAAGATTGCGTTAAAGCACTTATCATGGATATTTTTCTAGCCGGAGTAGAAACAGGGGCGACCACCATTGTTTGGATCATGACAGAGCTAGTTAGGAATCCAAGGGTGATGAAGAAGCTCCAAGACGAGATTAGAAGTTGCATAAAGGAAGATTCAGTGAAAGAGATGGACTTGGAAAAACTCGAGTATCTAAAAATGGTAGTGAAAGAGGCTTTGAGATTGCATCCACCGGTCCCACTTCTACTTCCAAGGAAAACCATCTCCTCTTTTAAGCTCAATGGTTACAATATCGACCCCAAGACTCATCTTCACATTAATATGTGGGCCATTGGACGAGACCCACAATCTTGGACTAAACCAGAAGAGTTCTTTCCCGAGAGGTTTATAGGAAGCAATATCGATTATAAAGGACAAAACTTCGAGTTAATACCTTTTGGAAGCGGGCGAAGAATTTGCCCTGGGATGAGTATGGCGACCCTTACCGTGGAGCTGGCACTAGCTAACCTGCTGCTGTGTTTTGATTGGAAACTACCGGATGGAATGAAAGAAGAAGATGTTGATATGGAAGAGGCCGATGGTCTTGCAGCGCCCAAGAAATCACCCCTTAGACTTATTCCCGTCCTTTACTTTTAG 1515 43.96 MMSNNLIIWVPLLFLCSSLLLLKTIRKHSNPKNKLLPPSPLKLPLLGHLHLLGSLPHRSLSKLSKKYGPVMLLQLGSVPTIVISSAAAARELFKFHDLASCSRPRLTGSGRFSYNFLDLNLSPYGERWRELRKICMHELFTARRVQSFWEIREEEVGRLVKSISQSSSSSASINLSEKSYSLTANITTRVAFGSIFSGGKLDDEHFQHVIRRAVAAIGSFSMTDFIPTFGWIIDRLTGVHGRLEKSFGEMDAFFQHVVDDRINFKKSSKNEENIVDVLLRMERESSESDVLQVTQDCVKALIMDIFLAGVETGATTIVWIMTELVRNPRVMKKLQDEIRSCIKEDSVKEMDLEKLEYLKMVVKEALRLHPPVPLLLPRKTISSFKLNGYNIDPKTHLHINMWAIGRDPQSWTKPEEFFPERFIGSNIDYKGQNFELIPFGSGRRICPGMSMATLTVELALANLLLCFDWKLPDGMKEEDVDMEEADGLAAPKKSPLRLIPVLYF 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9435477 9437104 - CmoCh04G018740.1 Cmo04g01874 380849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01874 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cmo04g01874 504 PANTHER CYTOCHROME P450 71B11-RELATED 7 502 - -
Cmo04g01874 504 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01874 504 PANTHER CYTOCHROME P450 71B16-RELATED 7 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01874 Cmo-Chr4:9435477 Cmo04g01878 Cmo-Chr4:9497654 0 dispersed
Cmo04g01879 Cmo-Chr4:9511256 Cmo04g01874 Cmo-Chr4:9435477 3.57E-18 dispersed
Cmo04g01874 Cmo-Chr4:9435477 Cmo04g01876 Cmo-Chr4:9446496 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01874 - K01773 cmos:111458142 798.119