Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01877 ATGCTCCTCCAATTGGGCTCTGTCCCAACCATCGTGATCTCCTCTGCCGCTGCTGCAAGAGAGTTGTTTAAATTTCATGACCTTGCTTCTTGCAGCCGCCCTCTCTTACACGCCAACAGAAGAATTGCGTACAACTATCTTGACATAAGTTCCACTCCATACGGTGATCACTGGAGGAACGTTCGAAAGATTTGTATGCTCGAGCTCTTCACTTCTCGGCGGGTGGAATCTTTTCGGGAAATTAGAGAACAGGAAGTGGGTCGGCTTGTAAACTCTATCACTCAATCCTCTTCTGCTTCATCTCCAATCGATCTGACTCAGAAATCCTATTCTCTCACAGCAAATATAACAACAAGAGTTGCTTTCGGAAGCATTTTCAGCGGGGGAAAATTAGATGATGAACACTTTCAACGTGTTATAAAGAGAGCAGTTGCAGCAATTGGAAGCTTCTCCATGACTGATTTCATTCCTACTTTCGGTTGGATTATTGATCGGTTGAATGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGCTGAGATGGATGCCTTTTTTCAACATGTGGTCGACGATCGTATCAACTTCAAGAAGACTTCTAAGAACGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAGAGGGAAAGCGCTGAATCTGATGCACTAAAAGTCACCCAAGATTGCATTAAAGCACTCATCAAGGATATTTTTATAGCGGGAGTAGAAACAGGAGCAGACGTCATTATTTGGGCCATGAGAGAGTTGGTTAGGAACCCAAGGGTGATGAAGAAGCTCCAAGACGAGATCAGAAGTTGCATAAAAGAAGATTCAGTGAAAGAGGTCGACCTAGAAAAGTTTGAGTATCTAAAAATGGTAGTGAAGGAGGTTCTGAGATTGCATCCACCAGCCCCTCTTTTAGTTCCAAGAGAAACTATCTCCCCTTTTAAGCTCAACGGTTACGATATTGACCCCAAGGTTCATCTTCACATTAATGTGTGGGCCATTGGACGAGACCCACAATCCTGGACTGACCCAGAAGAGTTCTTTCCTGAGAGGTTTATAGAAAGCAATGTCGATTACAAAGGACAAAACTTCGAGTTAATACCTTTCGGAGGCGGGCGAAGAATATGTCCTGGGATGAACATGGCAATCCTTACCGTGGAGTTGGCACTGGCTAACCTCTTGCGGTGTTTTGATTGGAAACTGCCAAATGGAACGAAGGAAGAAGATGTAGATATGGGAGAAGACGTTGGTATTATCATTGCCAAGAAATCACTCCTTAAATGTATTCCAGACCTTTCAAGTAATTTTTAG 1311 43.4 MLLQLGSVPTIVISSAAAARELFKFHDLASCSRPLLHANRRIAYNYLDISSTPYGDHWRNVRKICMLELFTSRRVESFREIREQEVGRLVNSITQSSSASSPIDLTQKSYSLTANITTRVAFGSIFSGGKLDDEHFQRVIKRAVAAIGSFSMTDFIPTFGWIIDRLNGVHGRLEKSFAEMDAFFQHVVDDRINFKKTSKNEENIVDVLLRMERESAESDALKVTQDCIKALIKDIFIAGVETGADVIIWAMRELVRNPRVMKKLQDEIRSCIKEDSVKEVDLEKFEYLKMVVKEVLRLHPPAPLLVPRETISPFKLNGYDIDPKVHLHINVWAIGRDPQSWTDPEEFFPERFIESNVDYKGQNFELIPFGGGRRICPGMNMAILTVELALANLLRCFDWKLPNGTKEEDVDMGEDVGIIIAKKSLLKCIPDLSSNF 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9459183 9460594 - CmoCh04G018770.1 Cmo04g01877 380852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01877 436 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Cmo04g01877 436 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 227 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 247 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS P450 superfamily signature 238 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PANTHER CYTOCHROME P450 71B11-RELATED 1 430 - -
Cmo04g01877 436 SUPERFAMILY Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 Pfam Cytochrome P450 3 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01877 436 PANTHER CYTOCHROME P450 71B16-RELATED 1 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01872 Cmo-Chr4:9421758 Cmo04g01877 Cmo-Chr4:9459183 0 dispersed
Cmo04g01877 Cmo-Chr4:9459183 Cmo04g01880 Cmo-Chr4:9530369 0 dispersed
Cmo04g01885 Cmo-Chr4:9601115 Cmo04g01877 Cmo-Chr4:9459183 8.10E-65 dispersed
Cmo04g01876 Cmo-Chr4:9446496 Cmo04g01877 Cmo-Chr4:9459183 0 tandem
Cmo04g01877 Cmo-Chr4:9459183 Cmo04g01878 Cmo-Chr4:9497654 0 tandem
Cmo18g00744 Cmo-Chr18:9146840 Cmo04g01877 Cmo-Chr4:9459183 2.10E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01877 - K01773 cmos:111458142 713.375