Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01881 ATGCTTAGCGTTGATAGAATTATGCCTAGTAATGATCTTATCATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTATTGCTTCTTAAAACCATAAGAAAACACTTAAAACCCAACAATAAGCTTCTTCCTCCAGGCCCTCCAAAGCTTCCTTTGCTGGGCCATCTGCACCTCATTGGCTCCCTCCCCCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTTCAACTGGGCTCTGTCCCAACCGTCGTAATCTCCTCTGCCGCCGCTGCAAGAGAGTTGTTCAAATTTCACGACCTTGCTTCTTGCAGCCGACCTCCCTTACACGCCAACGGACGACTTTCGTACAACTATCTTGACATGAGTCTCGCTCCATACGGTGAACACTGGAGGAACGTCCGAAAGATTTGTATGCTTGAGCTCTTCAGTGCTCAGCGGGTTCAATCTTTTCAGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTCTAAACTCCATCTCTCAATCCTCTTCTTCTTCAGCTCCAATTGATCTGAGTGACAAATCTTATTCTCTCACCGCAAATATAATAACAAGAGTTGCTTTCGGAAGCATCTTCAGCGGAGGAAAATTAGATGATGAACACTTTCAACATGTTATGCATAGTGCATTAGCAGCAATTGGAAGCTTCTCGATGACCGATTTCATTCCTACATTCGGTTGGATTATTGATCGGTTGAATGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGCTGAAATGGATGCCTTTTTTCAACATGTAGTCGAGGATCGTATCAACTTCAAGAAGAGTTCTAAGAAGGAAGAAAACATTGTTGATGTTTTGCTTAGAATGGAAAAGGAAAGCTCTGAATCTGATGCATTAAAAGTCACCAAAGATTGCGTTAAAGCACTCATCATGGATATTTTTCTAGCCGGGGTAGAATCTGGAGCAGGCACTATTGTTTGGGCCATGTCAGAGCTAATTAGGAACCCAAGGGTGATGAAGAAGCTCCAAAACGAGATCAGAAGTTGCATAAAAAAAGATTCAGTGAAAGAGACGGATTTGGAAAAGCTTGAGTATCTAAAAATGGTAGTTAAAGAGGTTCTGAGGTTGCATCCACCAGCCCCTCTTCTACTTCCAAGAGAAACCATTTCCCCGTTTAAGCTCAACGGTTACGATATCGACCCCAAGACTCATCTTCACATTAATGTGTGGGCCATTGGACGAGACCCACAATCTTGGACTGACCCAGAAGAGTTCTTTCCAGAGAGGTTTATAGGAAGCAATATCGATTACAAAGGACAACACTTTGAGTTCTTACCATTCGGAGGCGGCCGAAGAATATGTCCTGGGATGAACATGGGTACCCTTATGATGGAGTTGGCACTGGCTAACTTGTTGTTTTGCTTTGATTGGAAACTCCCTGATGGAATGAAGGAAGAAGATGTAGATATGGAAGAGGATGGTGGTCTCACGGTTACCAAAAAATCACTCCTTAAACTTATTCCAGTCCTTTGGACTAATTTTTAA 1542 43.51 MLSVDRIMPSNDLIIWVPLLFLCSSLLLLKTIRKHLKPNNKLLPPGPPKLPLLGHLHLIGSLPHRSLSQLSKKYGPVMLLQLGSVPTVVISSAAAARELFKFHDLASCSRPPLHANGRLSYNYLDMSLAPYGEHWRNVRKICMLELFSAQRVQSFQEIREEEVGRLLNSISQSSSSSAPIDLSDKSYSLTANIITRVAFGSIFSGGKLDDEHFQHVMHSALAAIGSFSMTDFIPTFGWIIDRLNGVHGRLEKSFAEMDAFFQHVVEDRINFKKSSKKEENIVDVLLRMEKESSESDALKVTKDCVKALIMDIFLAGVESGAGTIVWAMSELIRNPRVMKKLQNEIRSCIKKDSVKETDLEKLEYLKMVVKEVLRLHPPAPLLLPRETISPFKLNGYDIDPKTHLHINVWAIGRDPQSWTDPEEFFPERFIGSNIDYKGQHFEFLPFGGGRRICPGMNMGTLMMELALANLLFCFDWKLPDGMKEEDVDMEEDGGLTVTKKSLLKLIPVLWTNF 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9548658 9550775 - CmoCh04G018810.1 Cmo04g01881 380856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01881 513 Pfam Cytochrome P450 44 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PANTHER CYTOCHROME P450 71B16-RELATED 14 510 - -
Cmo04g01881 513 Gene3D Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PANTHER CYTOCHROME P450 71B11-RELATED 14 510 - -
Cmo04g01881 513 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Cmo04g01881 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01881 513 SUPERFAMILY Cytochrome P450 44 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01881 Cmo-Chr4:9548658 Cmo04g01886 Cmo-Chr4:9602105 0 dispersed
Cmo04g01880 Cmo-Chr4:9530369 Cmo04g01881 Cmo-Chr4:9548658 0 tandem
Cmo04g01881 Cmo-Chr4:9548658 Cmo04g01882 Cmo-Chr4:9550987 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01881 - K01773 cmos:111458142 806.208