Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01883 ATGGAGGGTTTTGCCAGGCTTTTTGGATTGGCTAAGCCTTATTTGGTGGTCGTTTTTGTGCAGTTTGGTTATGCTGGAATGACGATTCTTGCTAAGTCTGCCTTGGACAAAGGGATGAGCCCACATGTTTTCGTCGTTTATCGTCATGCGGTTGCTACTCTTGTTATTGCTCCTTTTGCCCTTATCTTTAACAGGAAGGCGAGGACGAAGATGACTTTTTCGATACTTTGGAAGATTGTGTTGCTTGGTTTATTGGAGCCGGTGATCGATCAAAACTTATACTTTACGGGTATGAAGCTCACAACAGCAACGTTTACAGCAGCCATGTGCAATATTCTACCAGCTTTCTCTTTCCTTATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAGATCATAGGAACCATAGTGACAGTTGGAGGTGCCATGATTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAATGCCAACCAGCACTCAGCTTCTTCAGCTGGTTCTGCTAATCACCAAAGCCCACTCAAGGGCTCACTTATGATAGCAACTGGCTGCATTTGTTGGTCAGCTTTCATCACTCTTCAGGCAATTACATTGAAAGAATACCCGGTGGAGTTGTCGCTTACTGCATTGATATGCTTGGTGGGCACCATTGGAGGGTCAGGGGTGGCTTTGATCATGGAGAGGGGGAACCTTGGTGCTTGGGTTTTGCACTTAGACAGTCAGCTTCTGGCTGTTGTTTATTCTGGAGTAATATGTACAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTGTGACAGCATTCAGTCCTTTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGGCTGAGATAATGTTCTTGGGCAGGATTCTTGGAGCTGTGGCCATTATCAGTGGCTTGTACTTGGTTTTGTGGGGAAAAAGCAAAGATCAAACTTCAGTTGATTCAGAGTGTGATAAGATAACACCTTGTGAGCAACAAATGACTAGAAATGGTGAAGAATTTGTGGTGGTTGATGTTGCGAAAGAGGACACAAATTGA 1104 44.02 MEGFARLFGLAKPYLVVVFVQFGYAGMTILAKSALDKGMSPHVFVVYRHAVATLVIAPFALIFNRKARTKMTFSILWKIVLLGLLEPVIDQNLYFTGMKLTTATFTAAMCNILPAFSFLMAWACRLEKVNILKRGSQAKIIGTIVTVGGAMIMTFIRGPMLNLPWTNANQHSASSAGSANHQSPLKGSLMIATGCICWSAFITLQAITLKEYPVELSLTALICLVGTIGGSGVALIMERGNLGAWVLHLDSQLLAVVYSGVICTGVTYYIQGVVMQTKGPVFVTAFSPLSMILVAIMSSFILAEIMFLGRILGAVAIISGLYLVLWGKSKDQTSVDSECDKITPCEQQMTRNGEEFVVVDVAKEDTN 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9586137 9588737 - CmoCh04G018830.1 Cmo04g01883 380858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01883 367 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Cmo04g01883 367 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Cmo04g01883 367 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Cmo04g01883 367 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Cmo04g01883 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 330 - -
Cmo04g01883 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00228 Cmo-Chr4:1143604 Cmo04g01883 Cmo-Chr4:9586137 0 dispersed
Cmo04g01270 Cmo-Chr4:6434871 Cmo04g01883 Cmo-Chr4:9586137 6.47E-174 dispersed
Cmo04g01271 Cmo-Chr4:6450155 Cmo04g01883 Cmo-Chr4:9586137 0 dispersed
Cmo04g01883 Cmo-Chr4:9586137 Cmo04g02746 Cmo-Chr4:19879893 3.30E-151 dispersed
Cmo04g01883 Cmo-Chr4:9586137 Cmo04g00227 Cmo-Chr4:1137645 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01883 - - cmos:111458151 722.235