Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01884 ATGCTTAGAGTTGATGCAATGATGCCTACTAATGGTTTTTTCATCTGGGTTCCTCTGTTTTTCCTCTGTTCTTCTCTATTGCTTCTTAAAATCATAAGAAAACAGGCAAACCCCAACAACAAGCTTCTTCCTCCCACCCCTCCAAAGCTTCCTTTGTTGGGTCATTTGCACCTCATTGGCTCCCTCCCTCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTCCAATTGGGCTCTGTCCCAACCATCGTAATCTCCTCTGCCGCTGCTGCAAGAGAGTTGTTTAAATTTCATGACCTTGCTTCTTGCAGCCGCCCTCTCTTAACGGGCAATAGAAGATTTTCCTACAACTTCGTGGACCTAAATCTTTCACCGTACGGTGAACGTTGGAGGGAACTTCGGAAGATTTGTATGCTTGAGCTCTTCAATGCTAGGCGGGTACAATCTTTTCAGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTCTAAACTCCATCTCTCAATCCTCTTCTTCTTCAGCTCCAATTGATCTGAGTGACAAATCCTATTCTCTCACTGCAAATATAACATCAAGAGTTGCTTTTGGCAGCATCTTCAGCGGGGGAAAATTAGATGATGAACACTTTCAACATCTTATGCGGAGAGCAATTGCAGCAACTGGAAACTTCTCGATGACCGATTTCATTCCTACTTTTGGTTGGATTATTGATCGGTTGAATGGTGTTCATGAGAGGCTGGAGAAGAGCTTTGCTGAAATGGATGCCTTTCTTCAACATGTAGTCGACGATCGTATAAACTTCAAGGAGAGTTCTAAGAAGGAAGAAAACTTTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGCACTAAAAGTAACCCAAGATTGCATCAAAGCACTTATCATGGATATTTTTATAGCCGGAGTAGAAACCGGGGCAGCTACAATTGTTTGGGCCATGACAGAGCTAGTTAGGAATCCAAGAGTGATGAAGAAGCTCGAACACGAGATTAGAAGTTACGTAAAAGACGATTCAGTGAAAGAGATAGACTTGAAAAATCTTGAGTATCTAAAAATGGTAGTGAAAGAGGTATTGAGATTGCATCCACCAATCCCACTTCTACTTCCAAGGGAAACCATCTCCCCTTTTAAGCTCAACAGTTACAATATGGACCCCAAGGCTCATCTTCACGTTAATGTGTGGGCCATTGGACGAGACCCACAATCTTGGACTGACCCAGAAGAGTTCTTTCCCGAGAGATTTATAGGAAGCAATATCGATTATAAAGGACAGAACTTCGAATTAATACCGTTTGGAAGTGGGCGAAGAATTTGTCCTGGGATGAATATGGCAACCCTTGTGGTGGAGTTGGCCCTGGCTAACCTGTTGCTGTGTTTTGATTGGAAACTTCCAGATGGAATGAAAGAAGAAGATGTTGATATGGAAGAGGCTGTTGGTCTTGGGGCCGCTAAGAAATCACCCCTTATGCTTACTCCAGTCCCTTACTTTTAG 1536 43.23 MLRVDAMMPTNGFFIWVPLFFLCSSLLLLKIIRKQANPNNKLLPPTPPKLPLLGHLHLIGSLPHRSLSQLSKKYGPVMLLQLGSVPTIVISSAAAARELFKFHDLASCSRPLLTGNRRFSYNFVDLNLSPYGERWRELRKICMLELFNARRVQSFQEIREEEVGRLLNSISQSSSSSAPIDLSDKSYSLTANITSRVAFGSIFSGGKLDDEHFQHLMRRAIAATGNFSMTDFIPTFGWIIDRLNGVHERLEKSFAEMDAFLQHVVDDRINFKESSKKEENFVDVLLRMERESSESDALKVTQDCIKALIMDIFIAGVETGAATIVWAMTELVRNPRVMKKLEHEIRSYVKDDSVKEIDLKNLEYLKMVVKEVLRLHPPIPLLLPRETISPFKLNSYNMDPKAHLHVNVWAIGRDPQSWTDPEEFFPERFIGSNIDYKGQNFELIPFGSGRRICPGMNMATLVVELALANLLLCFDWKLPDGMKEEDVDMEEAVGLGAAKKSPLMLTPVPYF 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9593257 9595367 + CmoCh04G018840.1 Cmo04g01884 380859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01884 511 SUPERFAMILY Cytochrome P450 44 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PANTHER CYTOCHROME P450 71B16-RELATED 15 509 - -
Cmo04g01884 511 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 Gene3D Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01884 511 PANTHER CYTOCHROME P450 71B11-RELATED 15 509 - -
Cmo04g01884 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Cmo04g01884 511 Pfam Cytochrome P450 44 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01878 Cmo-Chr4:9497654 Cmo04g01884 Cmo-Chr4:9593257 0 dispersed
Cmo04g01884 Cmo-Chr4:9593257 Cmo04g01886 Cmo-Chr4:9602105 0 proximal
Cmo18g00738 Cmo-Chr18:9099920 Cmo04g01884 Cmo-Chr4:9593257 6.30E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01884 - K01773 cmos:111458142 934.865