Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01984 ATGTCCCTTCCGTCCCCTTCCCTCCTTCTCCTCTTCTTTCCTATCTTGCTTTCTCCCATCTCCGCCGCATCTGACCGGACCTTCCTCCCCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCATCAATGCCTCCTACTCAACCTCCTTCTCTCTCTCCCTTGCCTCAACCTCAGCACCAACAGCCCAAGCTCCCCTTCTCCTCCACTTCCTACTCCTCGCCCCCCAAACCCTTTTTTCCCTCCTACCCTTCTTCTCCCCCGCCGCCTCCGACCCCCCCTTCCACGGCGCTTCCTACGTTTCCGGCTAACATTTCTGCTCTTCTCTTCCCTCAGCCTACTTCTTCTTCCCACCACCTCCACCGCCACGTCTTTGCCATTGTCATCTCTCTCTCTCTTGCTTTCTCTGTTCTTGTTCTTCTCCTTGCTCTGTTCTTTTACTTTCGTAAGCGAAACCCACAAGTCTCTGCTACTGATAAGGCCTCCGGTACTGATAATCTCCGCCTCTACCCGCCGGGTATCGACACTTCCGATGGACTTCACAAGCACCGAACCTCCTCTACTACCACCTCCAAATTTCTCTATCTTGGGACTTTGGCTACTTCTCCAGAGATTGATGAGGAGGCTCCCGGAACTGTGGATGACGGTGCCGGCGGGATTGTGGAGTCGGTTTCTCCGGTGAAAATGGGATCTCCGGAGCTGAACCCCCTTCCGCCTCTTCCTCGCCGGAATTTCGCCCAAGATTATCAGAGGAATGTTGATGGTAATGATAAGGATGATGATGAAGATGGTGAGGACGAAGAGTTCTTTTCGCCGAGAGGGTCTTCCGTCGGCGGGAAGGAGAATATGGGGAGTAATAGAAGATTGAGCCCTGTGAAATTGTTTCAATATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCGAGTTTGAATTCTGGTTCACCCTCTGTTTCTGTTCCAAATAGTCCTTCTCCGCCATTGATCTTCAGCCCCACCAGCTTAATCTCGAAATCGCCTGACTCCATTATCAGATTTCCTGTTCCTGTACGGCAGCCGACGCTTCCGGTACCACCATCACCGTCCTTGTCCTCTGCTTCTTCGCCACTGGGAGGTTCCGGAAACACCAAGAACTCGCCATCGAGAGACCCCAATTTGTCGGAGCTACATCGGCAGTTCTCAAATGGATATAGAATGGATCACCAACAACCATTTCCGGTGAAACTGCCACCACCTCCACCTCCACCACCGCCACCGCCGCCTCCAATGTATTGGGAGATTCCTCAATCTTCCAATAATGAGCCAAATCTAGGTCCACCCGTACTCACAGTGCCATCAAGACCTATACTCTCCCAGAACATAGCTCATATGTCAGCAGAGGAGCAATCAAACGCCATTGGAGATGCAGAGCGAACGGAGGAAAATTCGAAGCCGAAACTGAAGGCATTACATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAAGAAATGATTGAATCACTTTTTATGGCGAATAACAATAATTCAAATCCAAGCAGCAAAGACAATGGTGGTGTTCGTCAAAACTTGGCTTTAGGGAATCAAGAGAATCGTGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGGAATTCAGATACTTTGGGTACCGAACTGCTCGAAAGCTTACTGAAAATGGCGCCAACAGAAGACGAGGAACGTAAATTAAGAGAATACAAAGACGATTCGCCTTTTAAACTTGGCCCAGCTGAGAAATTCCTCAAAGTAGTTCTTGATGTACCTTTTGCATTCAAAAGGGTGGATGCAGTGCTTTACATTGCCAATTTCGATTCTGAGGTCGAGTACCTCGACCGGTCCTTCGAAATGCTCGAGGCTGCTTGTAAAGAATTGAAAGACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGAATGAATGTAGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACGGATGGAAAGACGACTCTCTTGCATTTTGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACATTCCACCTCTGATCACAATGTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGATGTCGAATTTCGAAAGCTTGGTCTTCAAGTCGTTTCGGGTCTTAGCAGGGAGCTCTCAAATGTGAAAAAAGCTGCGTTAATGGATGCAGATGTGCTTAGCAACGACGTAGAGAAACTCGCTAGAGGGATCACGAAAATCACTGAGGTCATAAGATTGAACGAAGATATGTCGAAAGGAGGGAGCAAGTCAAATTTCTCGGCCTCGATGAACAGGTTCTTGGGGAAGGCAGCTGAAGAAGTAGCCAGGATTGAAGTCCGAGAGCGCATTGTCGTCTCCATGGTCAAGGAAATAACCGAATACTTCCATGGAAACTTAGCGAAAGAAGAAGCTCGACCGCTGCGTATTTTCATGGTGGTAAAGGATTTTCTTGGCATCTTAGATCAGGTATGCAAGGAAGTTGGAAGAATCAACGAAAGAACAATAGTCGGTTCGGCTCGACAATTTACGGGGCCTTCAAGTCAAAGTCTTCCATCAATTTTCCCGGGATTGTGCGAAAGTCAACGCTACGGTTCGTCTGATGATGATAGCTCATCTTCCTCGTCTTAG 2823 47.96 MSLPSPSLLLLFFPILLSPISAASDRTFLPLLRHHRHLLHQPFFPWTSSMPPTQPPSLSPLPQPQHQQPKLPFSSTSYSSPPKPFFPSYPSSPPPPPTPPSTALPTFPANISALLFPQPTSSSHHLHRHVFAIVISLSLAFSVLVLLLALFFYFRKRNPQVSATDKASGTDNLRLYPPGIDTSDGLHKHRTSSTTTSKFLYLGTLATSPEIDEEAPGTVDDGAGGIVESVSPVKMGSPELNPLPPLPRRNFAQDYQRNVDGNDKDDDEDGEDEEFFSPRGSSVGGKENMGSNRRLSPVKLFQYVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLIFSPTSLISKSPDSIIRFPVPVRQPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDPNLSELHRQFSNGYRMDHQQPFPVKLPPPPPPPPPPPPPMYWEIPQSSNNEPNLGPPVLTVPSRPILSQNIAHMSAEEQSNAIGDAERTEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMANNNNSNPSSKDNGGVRQNLALGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTEDEERKLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAVLYIANFDSEVEYLDRSFEMLEAACKELKDSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNVTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVEKLARGITKITEVIRLNEDMSKGGSKSNFSASMNRFLGKAAEEVARIEVRERIVVSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLGILDQVCKEVGRINERTIVGSARQFTGPSSQSLPSIFPGLCESQRYGSSDDDSSSSSS 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10269132 10273270 + CmoCh04G019840.1 Cmo04g01984 380959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01984 940 SMART it6_source 477 900 IPR015425 -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 50 67 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 83 103 - -
Cmo04g01984 940 SUPERFAMILY Formin homology 2 domain (FH2 domain) 419 898 - -
Cmo04g01984 940 Pfam Formin Homology 2 Domain 479 885 IPR015425 -
Cmo04g01984 940 ProSiteProfiles Formin homology-2 (FH2) domain profile. 477 911 IPR015425 -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 361 443 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 68 82 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 257 292 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 50 103 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 412 433 - -
Cmo04g01984 940 MobiDBLite consensus disorder prediction 371 406 - -
Cmo04g01984 940 PANTHER FORMIN-LIKE PROTEIN 2 29 937 - -
Cmo04g01984 940 PANTHER FORMIN-RELATED 29 937 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo04g01984 940 Gene3D Formin, FH2 domain 475 895 IPR042201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00543 Cmo-Chr2:3081604 Cmo04g01984 Cmo-Chr4:10269132 4.86E-173 dispersed
Cmo04g01984 Cmo-Chr4:10269132 Cmo19g00201 Cmo-Chr19:1313077 1.64E-16 dispersed
Cmo04g01984 Cmo-Chr4:10269132 Cmo02g01705 Cmo-Chr2:9770535 9.27E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01984 - - cmax:111492166 1474.91