Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01984 | ATGTCCCTTCCGTCCCCTTCCCTCCTTCTCCTCTTCTTTCCTATCTTGCTTTCTCCCATCTCCGCCGCATCTGACCGGACCTTCCTCCCCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCATCAATGCCTCCTACTCAACCTCCTTCTCTCTCTCCCTTGCCTCAACCTCAGCACCAACAGCCCAAGCTCCCCTTCTCCTCCACTTCCTACTCCTCGCCCCCCAAACCCTTTTTTCCCTCCTACCCTTCTTCTCCCCCGCCGCCTCCGACCCCCCCTTCCACGGCGCTTCCTACGTTTCCGGCTAACATTTCTGCTCTTCTCTTCCCTCAGCCTACTTCTTCTTCCCACCACCTCCACCGCCACGTCTTTGCCATTGTCATCTCTCTCTCTCTTGCTTTCTCTGTTCTTGTTCTTCTCCTTGCTCTGTTCTTTTACTTTCGTAAGCGAAACCCACAAGTCTCTGCTACTGATAAGGCCTCCGGTACTGATAATCTCCGCCTCTACCCGCCGGGTATCGACACTTCCGATGGACTTCACAAGCACCGAACCTCCTCTACTACCACCTCCAAATTTCTCTATCTTGGGACTTTGGCTACTTCTCCAGAGATTGATGAGGAGGCTCCCGGAACTGTGGATGACGGTGCCGGCGGGATTGTGGAGTCGGTTTCTCCGGTGAAAATGGGATCTCCGGAGCTGAACCCCCTTCCGCCTCTTCCTCGCCGGAATTTCGCCCAAGATTATCAGAGGAATGTTGATGGTAATGATAAGGATGATGATGAAGATGGTGAGGACGAAGAGTTCTTTTCGCCGAGAGGGTCTTCCGTCGGCGGGAAGGAGAATATGGGGAGTAATAGAAGATTGAGCCCTGTGAAATTGTTTCAATATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCGAGTTTGAATTCTGGTTCACCCTCTGTTTCTGTTCCAAATAGTCCTTCTCCGCCATTGATCTTCAGCCCCACCAGCTTAATCTCGAAATCGCCTGACTCCATTATCAGATTTCCTGTTCCTGTACGGCAGCCGACGCTTCCGGTACCACCATCACCGTCCTTGTCCTCTGCTTCTTCGCCACTGGGAGGTTCCGGAAACACCAAGAACTCGCCATCGAGAGACCCCAATTTGTCGGAGCTACATCGGCAGTTCTCAAATGGATATAGAATGGATCACCAACAACCATTTCCGGTGAAACTGCCACCACCTCCACCTCCACCACCGCCACCGCCGCCTCCAATGTATTGGGAGATTCCTCAATCTTCCAATAATGAGCCAAATCTAGGTCCACCCGTACTCACAGTGCCATCAAGACCTATACTCTCCCAGAACATAGCTCATATGTCAGCAGAGGAGCAATCAAACGCCATTGGAGATGCAGAGCGAACGGAGGAAAATTCGAAGCCGAAACTGAAGGCATTACATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAAGAAATGATTGAATCACTTTTTATGGCGAATAACAATAATTCAAATCCAAGCAGCAAAGACAATGGTGGTGTTCGTCAAAACTTGGCTTTAGGGAATCAAGAGAATCGTGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGGAATTCAGATACTTTGGGTACCGAACTGCTCGAAAGCTTACTGAAAATGGCGCCAACAGAAGACGAGGAACGTAAATTAAGAGAATACAAAGACGATTCGCCTTTTAAACTTGGCCCAGCTGAGAAATTCCTCAAAGTAGTTCTTGATGTACCTTTTGCATTCAAAAGGGTGGATGCAGTGCTTTACATTGCCAATTTCGATTCTGAGGTCGAGTACCTCGACCGGTCCTTCGAAATGCTCGAGGCTGCTTGTAAAGAATTGAAAGACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGAATGAATGTAGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACGGATGGAAAGACGACTCTCTTGCATTTTGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACATTCCACCTCTGATCACAATGTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGATGTCGAATTTCGAAAGCTTGGTCTTCAAGTCGTTTCGGGTCTTAGCAGGGAGCTCTCAAATGTGAAAAAAGCTGCGTTAATGGATGCAGATGTGCTTAGCAACGACGTAGAGAAACTCGCTAGAGGGATCACGAAAATCACTGAGGTCATAAGATTGAACGAAGATATGTCGAAAGGAGGGAGCAAGTCAAATTTCTCGGCCTCGATGAACAGGTTCTTGGGGAAGGCAGCTGAAGAAGTAGCCAGGATTGAAGTCCGAGAGCGCATTGTCGTCTCCATGGTCAAGGAAATAACCGAATACTTCCATGGAAACTTAGCGAAAGAAGAAGCTCGACCGCTGCGTATTTTCATGGTGGTAAAGGATTTTCTTGGCATCTTAGATCAGGTATGCAAGGAAGTTGGAAGAATCAACGAAAGAACAATAGTCGGTTCGGCTCGACAATTTACGGGGCCTTCAAGTCAAAGTCTTCCATCAATTTTCCCGGGATTGTGCGAAAGTCAACGCTACGGTTCGTCTGATGATGATAGCTCATCTTCCTCGTCTTAG | 2823 | 47.96 | MSLPSPSLLLLFFPILLSPISAASDRTFLPLLRHHRHLLHQPFFPWTSSMPPTQPPSLSPLPQPQHQQPKLPFSSTSYSSPPKPFFPSYPSSPPPPPTPPSTALPTFPANISALLFPQPTSSSHHLHRHVFAIVISLSLAFSVLVLLLALFFYFRKRNPQVSATDKASGTDNLRLYPPGIDTSDGLHKHRTSSTTTSKFLYLGTLATSPEIDEEAPGTVDDGAGGIVESVSPVKMGSPELNPLPPLPRRNFAQDYQRNVDGNDKDDDEDGEDEEFFSPRGSSVGGKENMGSNRRLSPVKLFQYVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLIFSPTSLISKSPDSIIRFPVPVRQPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDPNLSELHRQFSNGYRMDHQQPFPVKLPPPPPPPPPPPPPMYWEIPQSSNNEPNLGPPVLTVPSRPILSQNIAHMSAEEQSNAIGDAERTEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMANNNNSNPSSKDNGGVRQNLALGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTEDEERKLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAVLYIANFDSEVEYLDRSFEMLEAACKELKDSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNVTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVEKLARGITKITEVIRLNEDMSKGGSKSNFSASMNRFLGKAAEEVARIEVRERIVVSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLGILDQVCKEVGRINERTIVGSARQFTGPSSQSLPSIFPGLCESQRYGSSDDDSSSSSS | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10269132 | 10273270 | + | CmoCh04G019840.1 | Cmo04g01984 | 380959 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01984 | 940 | SMART | it6_source | 477 | 900 | IPR015425 | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 50 | 67 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 83 | 103 | - | - | |
Cmo04g01984 | 940 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 419 | 898 | - | - | |
Cmo04g01984 | 940 | Pfam | Formin Homology 2 Domain | 479 | 885 | IPR015425 | - | |
Cmo04g01984 | 940 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 477 | 911 | IPR015425 | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 361 | 443 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 257 | 292 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 50 | 103 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 412 | 433 | - | - | |
Cmo04g01984 | 940 | MobiDBLite | consensus disorder prediction | 371 | 406 | - | - | |
Cmo04g01984 | 940 | PANTHER | FORMIN-LIKE PROTEIN 2 | 29 | 937 | - | - | |
Cmo04g01984 | 940 | PANTHER | FORMIN-RELATED | 29 | 937 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cmo04g01984 | 940 | Gene3D | Formin, FH2 domain | 475 | 895 | IPR042201 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00543 | Cmo-Chr2:3081604 | Cmo04g01984 | Cmo-Chr4:10269132 | 4.86E-173 | dispersed | |
Cmo04g01984 | Cmo-Chr4:10269132 | Cmo19g00201 | Cmo-Chr19:1313077 | 1.64E-16 | dispersed | |
Cmo04g01984 | Cmo-Chr4:10269132 | Cmo02g01705 | Cmo-Chr2:9770535 | 9.27E-22 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01984 | - | - | cmax:111492166 | 1474.91 |