Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01987 ATGGATGGAAATGGTGGGATGAAGTGGACTGGAATCCGCCATTTTGTGAGGCTGAAACAGACTCTCCAACACTGGCAAGCTGTCACAGTTAACCCGAAATCCCAAGCATCCAATAAAAATCAAAGCCAAAGCCAAAATCATAATCGTGGGATCCTTTCACCAGCAATCAACAAAAGGCTGATGAATGCCATGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAGCATCTATCCGATGTCCCGAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGTAGGTTTATCATTCCCACCAGCTATCTTAGCCATTTGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTATGGATTCGATCACAGTGGTGGGCTAACACTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTACATGGAGGTTCAGCAGCTCGATGATCATCCTGATGAGCAGACCCCAGCTGAGAGTTCTTTAAGCAAGGAAGGATAA 507 47.73 MDGNGGMKWTGIRHFVRLKQTLQHWQAVTVNPKSQASNKNQSQSQNHNRGILSPAINKRLMNAMCCDSDEESCQSPEHLSDVPKGYLAVYVGPELRRFIIPTSYLSHLVFKVLLEKAEEEYGFDHSGGLTLPCEIETFKYLLKYMEVQQLDDHPDEQTPAESSLSKEG 168
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 10292259 10294258 + CmoCh04G019870.1 Cmo04g01987 380962
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01987 168 PANTHER BNAA02G05090D PROTEIN 7 157 - -
Cmo04g01987 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 157 IPR003676 GO:0009733
Cmo04g01987 168 Pfam Auxin responsive protein 58 144 IPR003676 GO:0009733
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01987 Cmo-Chr4:10292259 Cmo06g00005 Cmo-Chr6:19348 1.45E-89 dispersed
Cmo17g01369 Cmo-Chr17:10631575 Cmo04g01987 Cmo-Chr4:10292259 4.56E-16 dispersed
Cmo04g01987 Cmo-Chr4:10292259 Cmo01g01637 Cmo-Chr1:12425023 7.73E-26 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01987 K14488 - csv:101207913 246.514