Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02031 ATGGAGCAAGAAGATCGGATTGAAGAAGGTAGCTCCAGGTTGCTGCGGAGGAATAGCGTTACTGGCAGTAGTAACGATTACAGATGGGTTGATGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAAAGCGGAGATGGATATGGATCTATGAGAAGGAGATTGGTTAAGAAGCCCAAGAGAGTCGATTCTTTTGACGTTGAAGCTATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGCTTCCATTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTATATGGTGATATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTAGTGATTTACACAATTGCTCTTATTCCGTTGGCAAAATACGTTTTTGTAGTGCTCAAAGCCAACGACAATGGTGAAGGAGGAACATTTGCATTGTACGCCAAAGTTAACATGCTGCCAAACCGTCAGACAGCTGATGAACATATCTCAAGTTTTAAGCTCAAACTACCAACTCCAGAGTTGGAAAGGGCCTTAAATATCAAAGAAACTCTCGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGCTGGTTCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTGGTCGTTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACGGGGAAAGTAGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGCCTGGGATCTATTGGAATTTACAATTTAGTGAAGTATGATCTCACCGTTATAAGGGCTCTCAATCCTGCTTACATCTATTTATTCTTCAAGAAAAATTCTAATAACGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGCCATTTCACCGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCCTGGCGTACATGGGTCAGGCTGCATATCTCATGAAACATCCAGAATCTGCAGCAAGAATATTTTATGATTCTGTGCCAGTCTTTGTGACAGCAGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCGACCTTTTCTTGTGTCAAACAATCTATGGCTCTTGGTTGTTTTCCGAGAATGAAGATAGTTCACACATCTAAGAGACGAATGGGTCAAATTTACATCCCTATGATCAATTGGTTTTTGATGATAATGTGCATACTTGTTGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCCTATGGTATTGCTGAAGTTGGTGTGATGCTGGTGAGTACTGCCCTGGTGACCCTAGTAATGCTTCTGATCTGGCAGACAAATTTGTTTCTTGCGTTATGTTTCCCACTTGTATTTGGATCAGTGGAACTTATCTACTTATCTGCAGTTTTATCAAAAATCAGAGAAGGTGGGTGGTTGCCACTTGCTTTTGCGTCCGTTTTCCTCTCTGTGATGTACATATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGAGAAGATATCAACGGATTTCTTGTTTGAACTGGGATCTACCCTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAACGAGCTTGTCCAAGGCATTCCAGCAATTTTTGGGCAATTTCTTCTCACCCTTCCAGCCATCCACTCCACAATTGTGTTCGTGTGTATTAAATATGTTCCAATACCCGTGGTTCCGCAAGAGGAAAGATTTTTGTTCAGAAGGGTTGGTCCAAAAGACTACCATATATTTCGTTGCATCGCGAGATATGGCTACAAGGATGTGCGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTGATGACCTTGCCCTGGAGAGCAATTTGAATGAGTTGGAATTTGATAATATTTCAGAGAGGTTGAGGGATTCTTCTCCAACCCCAGGTGGCATTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAAGAGGAAAGAACGACAAGCTCGGAAGAATCTCTTGGGGCGCGGTTGCCATCCAGCATCATGGCATCGGGTGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTAGGGAAGCCATGGATTCAGGATTTACGTATCTACTGGCACAAGGGGATGTCCGAGCAAAGAAAAACTCATTTTTTATTAAGAAGCTTGTTATCAACTATTTCTATGCGTTCCTAAGGAGGAACTGCAGGGGCGGTGCAGCAACAATGCGAGTTCCTCACATGAACATCATGCAAGTTGGGATGACTTACATGGTTTGA 2484 43.36 MEQEDRIEEGSSRLLRRNSVTGSSNDYRWVDGSEVDSESPPWSLFEERESGDGYGSMRRRLVKKPKRVDSFDVEAMEIAGANYHHLKDASIWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLKANDNGEGGTFALYAKVNMLPNRQTADEHISSFKLKLPTPELERALNIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVVVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVIRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPESAARIFYDSVPVFVTAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPMINWFLMIMCILVVAIFRRTTDIANAYGIAEVGVMLVSTALVTLVMLLIWQTNLFLALCFPLVFGSVELIYLSAVLSKIREGGWLPLAFASVFLSVMYIWNYGSVLKYQSEVREKISTDFLFELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLTLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHIFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESDDLALESNLNELEFDNISERLRDSSPTPGGIDVNEELRIPLMEEERTTSSEESLGARLPSSIMASGDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10959569 10965793 + CmoCh04G020310.1 Cmo04g02031 381006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02031 827 TIGRFAM kup: potassium uptake protein 97 827 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g02031 827 MobiDBLite consensus disorder prediction 14 30 - -
Cmo04g02031 827 Pfam K+ potassium transporter 98 659 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g02031 827 MobiDBLite consensus disorder prediction 1 44 - -
Cmo04g02031 827 PANTHER POTASSIUM TRANSPORTER 12-RELATED 10 827 - -
Cmo04g02031 827 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 827 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02031 Cmo-Chr4:10959569 Cmo14g01424 Cmo-Chr14:11605386 0 dispersed
Cmo16g00273 Cmo-Chr16:1224915 Cmo04g02031 Cmo-Chr4:10959569 5.93E-52 dispersed
Cmo16g00274 Cmo-Chr16:1231457 Cmo04g02031 Cmo-Chr4:10959569 3.43E-35 dispersed
Cmo04g02031 Cmo-Chr4:10959569 Cmo04g00419 Cmo-Chr4:2077457 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02031 K03549 - csv:101202804 1449.49