Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02108 ATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTCTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGGTTCAAAATTAGTGGAACCCATTTGGTTGTCTTTTCACCCCTATGGCTTTTTCATTTAGTTGCAGCAAGAGGCAGATTTTCTCTACCTGCTCCATCAATGCCTCATGACCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTACTTCTTTGTATATATTTAGAGTGCAGTAATGTTATAGATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGATAGCAATTTTGGTCGACAATATCAGGATGTGTAGAGCCCTACTGCCTGGAGATGAAGAAGACAACGTAAGCGATGAAGTTATATGGGAAACGCTTCCTCACTTCTGGGTCTCAATCTCCATGGTTTTCTTCATCGCTGCAACCCTTTTCACTCTTCTTAAGCTTAGTGGCAGTGTAGCTGCTCTGGGCTGGTGGGATTTATTTATAAATTACTGGTACATTGACTTTGAGTCTGCTTTAAATATATGTGGTTAA 636 43.24 MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWFKISGTHLVVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEIAILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLSGSVAALGWWDLFINYWYIDFESALNICG 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13506098 13510680 - CmoCh04G021080.1 Cmo04g02108 381083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02108 211 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 9 200 - -
Cmo04g02108 211 Pfam Transmembrane Fragile-X-F protein 35 198 IPR019396 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02108 Cmo-Chr4:13506098 Cmo10g00269 Cmo-Chr10:1183016 4.08E-82 dispersed
Cmo04g02108 Cmo-Chr4:13506098 Cmo11g00263 Cmo-Chr11:1296730 2.97E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02108 - - pvy:116124897 309.686