Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g02221 | ATGGAACACTTCTTGGGTCTTCTCCGAATTCGGGTGCTGCGCGGTTCTAATCTGGCTGTTCGTGATACTCGTAGCAGTGATCCTTTTGTCGTCGTCACTATGGGCGATACGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAACTGACTCTTTCTATTGCAGATCTTAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACAGTAACAGACCATGACAAAATGGGAGATGCCGCAATTGACATCGAACCATACATCGAATGTCTGAAGATGGGACTGGAAAGCCTCCCAGAGGGGTGTGTGGTTAAGAGGGTATATCCAAGCAGAACAAACGACTTAGCTGATGAGAGCCAATGTGTTTGGAACAAAGGGAAAATTATACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGAGATTCAGCTCGAATGGATCGATGTTCCGGGATCTAAGGGTCTGCCGAAAGAGGGTATGAGCCACTTCTAA | 522 | 45.59 | MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSIADLRTPIGLSVYDKDTVTDHDKMGDAAIDIEPYIECLKMGLESLPEGCVVKRVYPSRTNDLADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF | 173 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 16597224 | 16599556 | - | CmoCh04G022210.1 | Cmo04g02221 | 381196 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g02221 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
Cmo04g02221 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
Cmo04g02221 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Cmo04g02221 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
Cmo04g02221 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 158 | IPR035892 | - | |
Cmo04g02221 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - | |
Cmo04g02221 | 173 | Gene3D | C2 domain | 4 | 169 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02221 | Cmo-Chr4:16597224 | Cmo18g00057 | Cmo-Chr18:373965 | 1.37E-72 | dispersed | |
Cmo04g00055 | Cmo-Chr4:306494 | Cmo04g02221 | Cmo-Chr4:16597224 | 4.70E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g02221 | - | - | csv:101204404 | 305.834 |