Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02312 ATGAAGCCGTTGTTCGACAGAGAACCAGAGGATTACAGAGAGAAATTTCTGGAGAAAGTACAAAAAGTAAAATCCAGTTTGCAGTTTCAGCCCAAAATAGGAGAAGAAGAGAAAGCTGAAGAACTTCGCAGCTTCGACTTCCAGTTCCACAACGAAGCCCGAATTCCATTACTGCAGCTTTCACCAGAGCTTCCTTTCAATCTCTTTCTCTCTATAATCGGCGAAAATCCTCTTCTTTTTCGTTTTCGTTCTTCCATATTCGCTCCTTTTTGTTTTTCTCTGTTTAGGATTATGCCAGACGTGCAAGCTCTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGCTCTTTGGCCACCGCGAAGCATACAGCTGAATTGCTTCGTTCTGTCATTTCCCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGAGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTCTGCACATTATTAGGGAGGAGGATCTCTCTCTCACCACAGCTTCAATTGCTGGGTTGAATTTAGCAGCAGTTAGTGATGATGAAGATGACAATGAAAAAGATGATCGTCCAGTCCTCTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAACCAAGCATCTGTTCATCAAACTTCTTCATCTGGTGGTGATTCAGAAGGAAAGAGCAAATCTGCGGATAAAAGTTCAAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTGGAACACATTCATCAAAACGAGGTAATATTAACTCTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCCAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCTCGGGTGAATATGGTAATAGTTGGCGCTCATGCTGTCATGGCAAATGGTGGTGTCATAGCACCTGTTGGATTGAATATGTTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCATCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGTATGGACTTCGGAACTAACACTGGTTCTCCTCTTCTTCACGTAGTTAACCCTACATTTGACTATGTGCCGCCAGCACTCGTTAGTTTATTTATTACTGACACAGGCGGCCATAACTCATCATACATGTATCGGCTTATTTCTGATTATTATTCAGCTGATGATTTGGTAATTAAACGAAGGCTTTCTACAGGGAGCTGA 1545 43.5 MKPLFDREPEDYREKFLEKVQKVKSSLQFQPKIGEEEKAEELRSFDFQFHNEARIPLLQLSPELPFNLFLSIIGENPLLFRFRSSIFAPFCFSLFRIMPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLNLAAVSDDEDDNEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMLALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPALVSLFITDTGGHNSSYMYRLISDYYSADDLVIKRRLSTGS 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17194349 17203958 - CmoCh04G023120.1 Cmo04g02312 381287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02312 514 Pfam Initiation factor 2 subunit family 116 486 IPR000649 GO:0044237
Cmo04g02312 514 MobiDBLite consensus disorder prediction 240 258 - -
Cmo04g02312 514 PANTHER BNAA01G32370D PROTEIN 151 506 - -
Cmo04g02312 514 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 151 506 - -
Cmo04g02312 514 Gene3D - 291 498 IPR042529 -
Cmo04g02312 514 SUPERFAMILY NagB/RpiA/CoA transferase-like 98 503 IPR037171 -
Cmo04g02312 514 MobiDBLite consensus disorder prediction 240 273 - -
Cmo04g02312 514 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02312 Cmo-Chr4:17194349 Cmo11g00252 Cmo-Chr11:1242944 8.04E-18 dispersed
Cmo08g00800 Cmo-Chr8:5068338 Cmo04g02312 Cmo-Chr4:17194349 1.04E-21 transposed
Cmo15g00850 Cmo-Chr15:4301204 Cmo04g02312 Cmo-Chr4:17194349 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02312 K03754 - csv:101220366 742.651