Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g02319 | ATGGCGCTCTCTGATAGACCTTCTCGCCAATCTCTGATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGCACTCTGCCCATTAAGAAGATGCTTCAGTCTTCATCCACTTTTGATGCGGTTTCCTCTTCTCCTAAGACCTTTGCTATTCCGGCCCCGAGTGAACCGTCTAAGAAGATTGAGTTGTACTCGCCGGCGTTCTACGCTGCTTGTACTTTTGGTGGGATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATCGACCCTGCGAAATACAAAAGCATTTCGTCGGGTTTTGGAATTTTGCTAAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTTCTTGGCTACAGTGCTCAGGGTGCTTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCTGCTAAGTACAAGACCTTGATCTACCTTGCTGGCTCTGCATCGGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTCAAGGTTCGGGTTCAAACTCAGCCTGGATTCGCTAGAGGGCTAGCGGATGGACTTCCCAAGTTTGTCAAATCTGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCTTCCTTCGAGACAATTGTCGAGATGATATACAAGTATGCCGTTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTATTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTGTCATTCCTCAACAATGCCAAAGGAGCAACTGTTGGAGACGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTCCGTATCGTCATGATTGGAACTCTTACTGGTGCTCAATGGGGCATTTACGATGCATTCAAAGTGTTCGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCCGCACCTTCTGCTTCTGAGCTTGCAAATGCGTGA | 1107 | 48.24 | MALSDRPSRQSLIPSFLYSSPSSTRTLPIKKMLQSSSTFDAVSSSPKTFAIPAPSEPSKKIELYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAVPTPKDQCSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPSASELANA | 368 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 17230367 | 17233503 | - | CmoCh04G023190.1 | Cmo04g02319 | 381294 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g02319 | 368 | PANTHER | MITOCHONDRIAL PHOSPHATE TRANSPORTER | 1 | 361 | - | - | |
| Cmo04g02319 | 368 | SUPERFAMILY | Mitochondrial carrier | 70 | 340 | IPR023395 | - | |
| Cmo04g02319 | 368 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 1 | 361 | IPR044677 | GO:0005315|GO:1990547 | |
| Cmo04g02319 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 265 | 344 | IPR018108 | - | |
| Cmo04g02319 | 368 | Pfam | Mitochondrial carrier protein | 70 | 153 | IPR018108 | - | |
| Cmo04g02319 | 368 | Pfam | Mitochondrial carrier protein | 168 | 252 | IPR018108 | - | |
| Cmo04g02319 | 368 | Gene3D | Mitochondrial carrier domain | 68 | 345 | IPR023395 | - | |
| Cmo04g02319 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 164 | 248 | IPR018108 | - | |
| Cmo04g02319 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 67 | 151 | IPR018108 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g02319 | Cmo11g01578 | CCT | |
| Cmo04g02319 | Cmo11g01578 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g02319 | Cmo-Chr4:17230367 | Cmo11g01578 | Cmo-Chr11:11333119 | 0 | dispersed | |
| Cmo15g00842 | Cmo-Chr15:4272535 | Cmo04g02319 | Cmo-Chr4:17230367 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g02319 | K15102 | - | csv:101221771 | 675.626 |