Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02319 ATGGCGCTCTCTGATAGACCTTCTCGCCAATCTCTGATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGCACTCTGCCCATTAAGAAGATGCTTCAGTCTTCATCCACTTTTGATGCGGTTTCCTCTTCTCCTAAGACCTTTGCTATTCCGGCCCCGAGTGAACCGTCTAAGAAGATTGAGTTGTACTCGCCGGCGTTCTACGCTGCTTGTACTTTTGGTGGGATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATCGACCCTGCGAAATACAAAAGCATTTCGTCGGGTTTTGGAATTTTGCTAAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTTCTTGGCTACAGTGCTCAGGGTGCTTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCTGCTAAGTACAAGACCTTGATCTACCTTGCTGGCTCTGCATCGGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTCAAGGTTCGGGTTCAAACTCAGCCTGGATTCGCTAGAGGGCTAGCGGATGGACTTCCCAAGTTTGTCAAATCTGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCTTCCTTCGAGACAATTGTCGAGATGATATACAAGTATGCCGTTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTATTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTGTCATTCCTCAACAATGCCAAAGGAGCAACTGTTGGAGACGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTCCGTATCGTCATGATTGGAACTCTTACTGGTGCTCAATGGGGCATTTACGATGCATTCAAAGTGTTCGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCCGCACCTTCTGCTTCTGAGCTTGCAAATGCGTGA 1107 48.24 MALSDRPSRQSLIPSFLYSSPSSTRTLPIKKMLQSSSTFDAVSSSPKTFAIPAPSEPSKKIELYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAVPTPKDQCSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPSASELANA 368
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 17230367 17233503 - CmoCh04G023190.1 Cmo04g02319 381294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02319 368 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 361 - -
Cmo04g02319 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cmo04g02319 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 361 IPR044677 GO:0005315|GO:1990547
Cmo04g02319 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cmo04g02319 368 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Cmo04g02319 368 Pfam Mitochondrial carrier protein 168 252 IPR018108 -
Cmo04g02319 368 Gene3D Mitochondrial carrier domain 68 345 IPR023395 -
Cmo04g02319 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cmo04g02319 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo04g02319 Cmo11g01578 CCT
Cmo04g02319 Cmo11g01578 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02319 Cmo-Chr4:17230367 Cmo11g01578 Cmo-Chr11:11333119 0 dispersed
Cmo15g00842 Cmo-Chr15:4272535 Cmo04g02319 Cmo-Chr4:17230367 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02319 K15102 - csv:101221771 675.626