Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02347 ATGTCTGGTTCTGATGGCGTCTCCCACAACAATGGCGCCATAATTCCCCACTCTCAACAGAGCACCCAGACCACCACCAACAATGGCGCTCTGCCTCTCAAGAAACCCCCTGCTAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGTCGTATTCGTATGCCCATCATTTGTGCTGCTCGTGTCTTTCAACTCACCCGCGAGTTGGGCCACAAATCCGACGGTCAGACCATTGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCCGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATCTGCGCTTCCCTCCGTGGCACTCCTGCCGCTCTTTCCTCTTCAGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGGCATAAAGACAACGACGGAAACGGCGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCTATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGTTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA 795 56.35 MSGSDGVSHNNGAIIPHSQQSTQTTTNNGALPLKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTICASLRGTPAALSSSASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17436112 17436906 - CmoCh04G023470.1 Cmo04g02347 381322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02347 264 MobiDBLite consensus disorder prediction 132 165 - -
Cmo04g02347 264 MobiDBLite consensus disorder prediction 1 47 - -
Cmo04g02347 264 MobiDBLite consensus disorder prediction 1 31 - -
Cmo04g02347 264 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 1 261 - -
Cmo04g02347 264 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 261 IPR005333 GO:0003700
Cmo04g02347 264 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Cmo04g02347 264 Pfam TCP family transcription factor 38 123 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02347 Cmo-Chr4:17436112 Cmo18g00812 Cmo-Chr18:9545980 5.86E-79 dispersed
Cmo15g00816 Cmo-Chr15:4063640 Cmo04g02347 Cmo-Chr4:17436112 9.49E-137 wgd
Cmo04g01331 Cmo-Chr4:6776828 Cmo04g02347 Cmo-Chr4:17436112 4.53E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9700 PF03634 TCP 4.10E-31 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02347 K16221 - csv:101214586 365.155