Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g02353 | ATGGCGAGCCGATACTGGATGGTTTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTTAGCGATGATCTCCTGAAGTCGAACAGCTTTGTGGAAGGAGTTTCCCAAAAGATCCGACGGCAGATCGAGGAACTGGAGAAGGTTTCTGGCGTGGAGAGCCACGGCTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGATATTGTGGATAGCATTCACACTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGGGTTGCTGAGTACAATAACGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTTGAAACCCTTCTTGTGATTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAACGAATATGCCCTTTACACTGTAACACTCTTTAGTCGCGTTGCAGACAATTTCAAAACAAGCGGACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTATGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGCATCTGTTTTGGCACCATCTGTTAAAAGTGAGAAGAAAGTTAGGTCAATCCTTGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGCAGGGATGGCTGGTCTTGGAGGAGAATCTGATGCACACCCATATGTGTCCTTCACAATCAATCTTGCCTAA | 1047 | 44.99 | MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIRRQIEELEKVSGVESHGLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHTQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLETLLVIVPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFSRVADNFKTSGREKGFQIREFEYSPEAQESRKQELEKLVQDQESMRSSLLQWSYASYAEASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGAGMAGLGGESDAHPYVSFTINLA | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17556423 | 17560493 | - | CmoCh04G023530.1 | Cmo04g02353 | 381328 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g02353 | 348 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C | 1 | 288 | IPR004907 | GO:0033180|GO:0046961|GO:1902600 | |
Cmo04g02353 | 348 | Gene3D | Vacuolar atp synthase subunit c; domain 1 | 5 | 40 | - | - | |
Cmo04g02353 | 348 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C | 289 | 348 | - | - | |
Cmo04g02353 | 348 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C | 289 | 348 | IPR004907 | GO:0033180|GO:0046961|GO:1902600 | |
Cmo04g02353 | 348 | Gene3D | - | 163 | 251 | - | - | |
Cmo04g02353 | 348 | Pfam | V-ATPase subunit C | 5 | 292 | IPR004907 | GO:0033180|GO:0046961|GO:1902600 | |
Cmo04g02353 | 348 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C | 1 | 288 | - | - | |
Cmo04g02353 | 348 | CDD | V-ATPase_C | 5 | 345 | IPR004907 | GO:0033180|GO:0046961|GO:1902600 | |
Cmo04g02353 | 348 | SUPERFAMILY | Vacuolar ATP synthase subunit C | 2 | 347 | IPR036132 | GO:0015078|GO:0033180|GO:1902600 | |
Cmo04g02353 | 348 | Gene3D | - | 41 | 291 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo15g00811 | Cmo-Chr15:4021810 | Cmo04g02353 | Cmo-Chr4:17556423 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g02353 | K02148 | - | csv:101221574 | 636.721 |