Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02353 ATGGCGAGCCGATACTGGATGGTTTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTTAGCGATGATCTCCTGAAGTCGAACAGCTTTGTGGAAGGAGTTTCCCAAAAGATCCGACGGCAGATCGAGGAACTGGAGAAGGTTTCTGGCGTGGAGAGCCACGGCTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGATATTGTGGATAGCATTCACACTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGGGTTGCTGAGTACAATAACGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTTGAAACCCTTCTTGTGATTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAACGAATATGCCCTTTACACTGTAACACTCTTTAGTCGCGTTGCAGACAATTTCAAAACAAGCGGACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTATGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGCATCTGTTTTGGCACCATCTGTTAAAAGTGAGAAGAAAGTTAGGTCAATCCTTGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGCAGGGATGGCTGGTCTTGGAGGAGAATCTGATGCACACCCATATGTGTCCTTCACAATCAATCTTGCCTAA 1047 44.99 MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIRRQIEELEKVSGVESHGLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHTQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLETLLVIVPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFSRVADNFKTSGREKGFQIREFEYSPEAQESRKQELEKLVQDQESMRSSLLQWSYASYAEASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGAGMAGLGGESDAHPYVSFTINLA 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17556423 17560493 - CmoCh04G023530.1 Cmo04g02353 381328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02353 348 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 288 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo04g02353 348 Gene3D Vacuolar atp synthase subunit c; domain 1 5 40 - -
Cmo04g02353 348 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 289 348 - -
Cmo04g02353 348 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 289 348 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo04g02353 348 Gene3D - 163 251 - -
Cmo04g02353 348 Pfam V-ATPase subunit C 5 292 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo04g02353 348 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 288 - -
Cmo04g02353 348 CDD V-ATPase_C 5 345 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cmo04g02353 348 SUPERFAMILY Vacuolar ATP synthase subunit C 2 347 IPR036132 GO:0015078|GO:0033180|GO:1902600
Cmo04g02353 348 Gene3D - 41 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00811 Cmo-Chr15:4021810 Cmo04g02353 Cmo-Chr4:17556423 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02353 K02148 - csv:101221574 636.721