Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02383 ATGGAGAAGAACCAACCTGAGAATCCAGACCTTCTTGAGAAAACCAACGAGGATGCCCCCAAATTGCCCGCTCATGATGCCGTTCCAGATGCTGTTGCTGTTGAATCCGATGTAAAATCTGCAGATAAATTGGAGGATGATAAGGATCAGGAGGAGAAGGAGAAGGAGAAGGAGAATGAGACGGAAAAGAAGGAGGAGTTGGAGGAGAAGGATGAGTCTAAGGATGAACCGGTTCTTCATTGTGATCTCCACACGATTCTTGAAGACGTAGATCAATTTCTGTTAACTTCTCACGGTTCTCGCGATCGAGAGGAGGATTCTGCTGTGGAGATTCCGAAGTTCATTGACAAGTTCATGGATCTCGTGGATGCGAAGATTGAGCAATACGAGAATACAGAATCGAATGCCAAGGAAAGAGAGTACCGAGTGCCGGAGGACGAATCTTCGTTTCTGGAAGCAGTTAATCGGATATCGAAGCTGAAAAGTGCAATCCACAAAATGAAGTTGGAAGACGAGAAGAATCCGTTGATCAATCGCATCGGGAGCACTCAACAGCGAGCATTTTCTTGTTTGGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAGAAATGGCGATTCGGATCCCGAACCGGATCGTTGTGATGATGCTGACTCCGCTCAACTCCTTTTTCCAGGTTACTCCGGCGAGATCGTGAGCTATTTGAACAAAATCGCTAACCAAATGATTGCCGGTGGATTCGAATCGGAATGTTGCCAAGTTTACATCGTAGCAAGAAGAAACATATTCGAAGATGCCTTGCAGAAGTTCGGATTCGAGAAATACAGCATTGATGATATTCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTATATGGATCAAAACCATCAAGCATTGCGCCACCGTTTTGTTCTCCGGCGAACGGGATCTCGCCGAATCTGTATTTTCAGCGTATCCTCCAATCTCCGCCAGTCTGTTCAGCAATCTAACTCGCGGCATTGTGATTCAACTCCTAAATTTCTCAGAAGGAGTCGCAATGACGAAACGTTCCGCCGAGAAATTGTTCAAGATGCTCGACATGTACGAAGCTCTTCGTGATCTGGTCCCAAAAATGGAAAACTTATTTCCAGAAGAATCCGCCAACGAGCTCAAAACAGAGTCCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAAAACTCGATCAAAGCCGACACGGGACGAACTCCGGTACCGGGCGGCGCGGTTCATCCATTGACTCGATACACGATGAACTACTTGAAATATGCGTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGATCACGCAAAGATCGAGCGAGCAGATTCCACAAACCGACCACATTTCGAAGGCGAACAACCACCGACTTACAACCACCCTAGCAATGACAATCAATCCCCATTCTCGACGGAACTGACGAAGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCGAAATCAAAGCTGTACAGAGACGTAGCACTGAGTTCGATTTTCATGATGAACAACGGGCGATACATCTTGCAGAAAATCAAAGGATCTGCAGAGATTCACGAACTGGTAGGCGATGCTTGGTACAGGAAGAGATCTTCGGAGTTACGCCAGTACCACAAGAACTACCAAAGAGAAACATGGGGAAGATTGTTGGGGTGTTTGAACCACGAGGGTTTGATGGTGCACGGGAAAGTGATAAAGCCAGTGCTGAAGGAGAAGTTCAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAGACGCAAAGCACGTGGGTGATAAGCGACGAGCAGCTTCAATCGGAGCTCCGAGTATCGATATCGGCGGTGATGATTCCGGCGTATAGGTCATTCCTAGCGAGGTTTTCGCAGTACTTGGATCCAGGGAGACAAACGGAGAAATACATTAAGCTACAGCCTGAAGACATAGAAACCTACATAGATGATCTATTCGATGGAAACGCATCCTCCATGGCAAGAAAGAGATGA 2037 46.78 MEKNQPENPDLLEKTNEDAPKLPAHDAVPDAVAVESDVKSADKLEDDKDQEEKEKEKENETEKKEELEEKDESKDEPVLHCDLHTILEDVDQFLLTSHGSRDREEDSAVEIPKFIDKFMDLVDAKIEQYENTESNAKEREYRVPEDESSFLEAVNRISKLKSAIHKMKLEDEKNPLINRIGSTQQRAFSCLEEEFRFFLEESRNGDSDPEPDRCDDADSAQLLFPGYSGEIVSYLNKIANQMIAGGFESECCQVYIVARRNIFEDALQKFGFEKYSIDDIQKMSWESMEREIAIWIKTIKHCATVLFSGERDLAESVFSAYPPISASLFSNLTRGIVIQLLNFSEGVAMTKRSAEKLFKMLDMYEALRDLVPKMENLFPEESANELKTESTTARTRLGEAAICIFCDLENSIKADTGRTPVPGGAVHPLTRYTMNYLKYACEYRNTLEQIFKDHAKIERADSTNRPHFEGEQPPTYNHPSNDNQSPFSTELTKVMELLDSNLEAKSKLYRDVALSSIFMMNNGRYILQKIKGSAEIHELVGDAWYRKRSSELRQYHKNYQRETWGRLLGCLNHEGLMVHGKVIKPVLKEKFKGFNALFEEIHKTQSTWVISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDDLFDGNASSMARKR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17768187 17770223 - CmoCh04G023830.1 Cmo04g02383 381358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02383 678 MobiDBLite consensus disorder prediction 1 24 - -
Cmo04g02383 678 Pfam Exo70 exocyst complex subunit 295 665 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo04g02383 678 MobiDBLite consensus disorder prediction 468 485 - -
Cmo04g02383 678 Coils Coil 34 76 - -
Cmo04g02383 678 SUPERFAMILY Cullin repeat-like 144 668 IPR016159 -
Cmo04g02383 678 MobiDBLite consensus disorder prediction 461 485 - -
Cmo04g02383 678 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 72 677 - -
Cmo04g02383 678 Coils Coil 119 139 - -
Cmo04g02383 678 Gene3D Exocyst complex component Exo70 120 677 - -
Cmo04g02383 678 MobiDBLite consensus disorder prediction 36 77 - -
Cmo04g02383 678 MobiDBLite consensus disorder prediction 1 77 - -
Cmo04g02383 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 72 677 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02383 Cmo-Chr4:17768187 Cmo06g01668 Cmo-Chr6:11548220 0 dispersed
Cmo15g00783 Cmo-Chr15:3851042 Cmo04g02383 Cmo-Chr4:17768187 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02383 K07195 - csv:101206040 1059.28