Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02426 ATGGGCTCGATAGACGTCCAATCAGACAATGCCGAAGATGGATCCGCCGCCGCCGCTTCTGCCGATGGACATCAAAAGAAAGTTTCCGCCGATCCTATAAACCAGACATCTAACGAACCAGACGGAGCTACGCCTGAGAAGCCTAAAGAATTGGAGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTCGAGGTTGGGACCCGCGTCATGTGCCGCTGGAGAGACGGGAAGTACCATCCCGTTAAGGTCATCGAACGTCGGAAGTTGCAGGCTACTGGTTTTAGTGATTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGAATCAGTTGAGACTGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACGCATGTTGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGAGGGAGCATGAAGAATTTACAAAAGTTAAGAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAATACAATGACACTACGAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTCAAGCATCCACCTGGTGATGAAATATATCGAAGTGGTACTTTGTCAATGTTTGAGGTTGACGGAAAAAAGAACAAGGTCTATGGGCAGAACCTCTGTTATTTAGCGAAGTTATTTCTGGACCACAAGACTCTATATTATGATGTGGACCTTTTTCTATTTTATATCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGAAAGTTCTTAATGGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACGCCTGAAAGACCTCTTTCTGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGGGTACTTTTGGACATCTTGAAAAAGCACAAGGGGAATATCTCTATCAAGGAGCTAAGTGACATGACAGCCATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTTAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAAGGTTGA 1350 44.81 MGSIDVQSDNAEDGSAAAASADGHQKKVSADPINQTSNEPDGATPEKPKELEPTKKRMSSMLPLEVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLESVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLMAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18016868 18021951 - CmoCh04G024260.1 Cmo04g02426 381401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02426 449 Gene3D - 232 444 - -
Cmo04g02426 449 Gene3D - 53 173 - -
Cmo04g02426 449 Gene3D - 352 432 IPR036388 -
Cmo04g02426 449 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 174 445 IPR016181 -
Cmo04g02426 449 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 173 444 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cmo04g02426 449 Pfam RNA binding activity-knot of a chromodomain 64 122 IPR025995 -
Cmo04g02426 449 Pfam MOZ/SAS family 234 411 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cmo04g02426 449 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 21 448 - -
Cmo04g02426 449 SUPERFAMILY Chromo domain-like 55 174 IPR016197 -
Cmo04g02426 449 PANTHER HISTONE ACETYLTRANSFERASE 21 448 - -
Cmo04g02426 449 Pfam MYST family zinc finger domain 175 229 IPR040706 -
Cmo04g02426 449 MobiDBLite consensus disorder prediction 1 59 - -
Cmo04g02426 449 Gene3D - 174 230 - -
Cmo04g02426 449 CDD NAT_SF 285 343 - -
Cmo04g02426 449 CDD CBD_MOF_like 67 136 - -
Cmo04g02426 449 SMART chromo_7 78 137 IPR000953 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02426 Cmo15g00736 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00736 Cmo-Chr15:3602594 Cmo04g02426 Cmo-Chr4:18016868 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02426 K11308 - csv:101217824 850.506