Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02435 ATGCATCGTCTGCCTCAGTTTTTCTTACCTGGGAAACGAAAAAAAGCTATGGATTCGAGAAAAAACGCAGGTAAACCCAAGCTTGGCCGACTTAATGCGGCGAAGAACATCGATTATGACGCTCCTTCCTCGTCTTCTTCGCTCGAAGATTCTTCTGGATCTCTTTACACTCGGTCCATGGACACGCCGGATGCCTCCAGCTTTCGGATTAATGGGATCGACGGTGAAATTGATTTCATCTGTCGGACTTTAGGGCTAAACGGTCCTGAAGACTTTGGGATTCCGATGGAGGCTTGGGAGGCCAGAAAGCTTCGTTCATCTTCCGAGCTTCTACCGAAGTCGAGATTGCATACTATTGATAGCCCGAAGAGCGAGGAAGTTAGTATGGAGAAGGAAGATAAAGAAATCGAAGATGAATTGTGCCTTAGGGTTAAGGATTCGGTTCGAATTAGCGTTGAGCAATCGATGGCTAAGACCGAATCTCTCGAGTGGAATGAAAGCCGTATGGCTACTACTGTTGAATGTAGCCCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCGCCGCCGCCTATGGATGTCGATAATACTTGGGACATTTTGAAAACCTTTGCTCCTTTAGTTGACGAAGAAAATCGCGATGAAGTTCAAAAAGGAATCGAACCTTTTGTCGAAGGAGAAGGAGAGGGAAATATTGTCGGGCCTGTGGAGAATTCACCGCTCGTTCGGTCTTGGTGTTCTTTCACAACCTCGAATGATGATGACTGTTCGAGCTGCACTACAGAGCCTGCAAATATTTCACCCAATATGAGATGCAAACTCATCATCACGACTTGGATTAAAGGAAAACGTCTAGGGAGCGGTTCATTTGGATCTGTGTATGAAGCAATGTCACAGAGTGGGGCCTTCTTTGCAGTCAAGGAAGTATCACTGCTCGATGAAGATAGTCAGGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTCGAGCACGAGAACATAGTTCAGTACTATGGCACCGACACGGAGCCGGATGGGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAGGGCTCCCTTATGAGCCTATATCAGAGGGTTGTCCTTACGGATTCCATTGTTTCTGCCTATACAAGGCAGATTCTGTGTGGTTTAAAGTATCTTCATGAGCAAAATGTGGTTCATAGGGATATTAAATGTGCTAATATATTGGTGGATGTGAGTGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGACGTTAAATCTTGTAAGGGAACTCCGTTCTGGATGGCACCTGAGGTGGTTAATAGGAAGGGCCAGGGCTACGGTCTTCCAGCTGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACCCAGAAGCTTCCATACTCGGAATTCGAAAATCATATGCAGGCCCTATATCAGATTGGAAAAGGAAAACTACCGGCGATTCCCGACTCTCTCTCAGACGATGGGCGGGATTTCATTCTGCAGTGCCTTAAAGTTAATCCAAACGATCGTCTTACTGCAGCTGATCTTTTAAATCACCCGTTTGTTAAAAGACCAGCTTCCAGTTCATCAGGGTCAGCATCTCCTTACTACAGGCCAGGCAGAAGAATTTGA 1680 45.77 MHRLPQFFLPGKRKKAMDSRKNAGKPKLGRLNAAKNIDYDAPSSSSSLEDSSGSLYTRSMDTPDASSFRINGIDGEIDFICRTLGLNGPEDFGIPMEAWEARKLRSSSELLPKSRLHTIDSPKSEEVSMEKEDKEIEDELCLRVKDSVRISVEQSMAKTESLEWNESRMATTVECSPRSGINGARPPLLKPPPPMDVDNTWDILKTFAPLVDEENRDEVQKGIEPFVEGEGEGNIVGPVENSPLVRSWCSFTTSNDDDCSSCTTEPANISPNMRCKLIITTWIKGKRLGSGSFGSVYEAMSQSGAFFAVKEVSLLDEDSQGRQSIYQLQQEIALLSEFEHENIVQYYGTDTEPDGSKLYIFLELVSQGSLMSLYQRVVLTDSIVSAYTRQILCGLKYLHEQNVVHRDIKCANILVDVSGSVKLADFGLAKATKLNDVKSCKGTPFWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTQKLPYSEFENHMQALYQIGKGKLPAIPDSLSDDGRDFILQCLKVNPNDRLTAADLLNHPFVKRPASSSSGSASPYYRPGRRI 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18073433 18078923 + CmoCh04G024350.1 Cmo04g02435 381410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02435 559 SMART serkin_6 282 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02435 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Cmo04g02435 559 SUPERFAMILY Protein kinase-like (PK-like) 266 546 IPR011009 -
Cmo04g02435 559 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 19 163 - -
Cmo04g02435 559 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 178 550 - -
Cmo04g02435 559 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 19 163 - -
Cmo04g02435 559 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 178 550 - -
Cmo04g02435 559 Gene3D Transferase(Phosphotransferase) domain 1 274 552 - -
Cmo04g02435 559 ProSiteProfiles Protein kinase domain profile. 282 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02435 559 Pfam Protein kinase domain 284 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02435 559 MobiDBLite consensus disorder prediction 38 61 - -
Cmo04g02435 559 MobiDBLite consensus disorder prediction 174 194 - -
Cmo04g02435 559 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Cmo04g02435 559 MobiDBLite consensus disorder prediction 9 61 - -
Cmo04g02435 559 MobiDBLite consensus disorder prediction 540 559 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02435 Cmo15g00733 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02435 Cmo-Chr4:18073433 Cmo02g01089 Cmo-Chr2:6606331 1.84E-78 dispersed
Cmo04g02447 Cmo-Chr4:18131170 Cmo04g02435 Cmo-Chr4:18073433 1.82E-23 dispersed
Cmo06g01376 Cmo-Chr6:10134502 Cmo04g02435 Cmo-Chr4:18073433 1.51E-21 dispersed
Cmo15g00716 Cmo-Chr15:3479276 Cmo04g02435 Cmo-Chr4:18073433 1.08E-21 dispersed
Cmo15g00733 Cmo-Chr15:3583896 Cmo04g02435 Cmo-Chr4:18073433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74303 PF00069 Pkinase 5.00E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02435 K13414 - csv:101218538 857.44