Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02463 ATGATGGGTATGAATTCTAACTTTATGAGTAAGTTGAAGCCTTACATTCTAGTGGTGTGCTTACAATTTGGAATGGCTGGCATATATGTTATATCCATGGCTACTCTTAACGGCGGCATGAGCCGCTATGTTTTGATCGTCTACCGAAACGTTGTCGCCGCTCTCTTCCTCGCTCCCTTTGCACTAATCTTCGAAAGGAAAACAAGGCCAAAGATGACACTCCCAGTCGCTATGCAAATCATGGTCTTGGGATTTCTTGAACCGGTTCTTGATCAGGGGTTCGGTTATTTGGGGATGTCGTACACGTCCGCGTCGTTTACTTCGGCTATCATGAACGCTGTGCCGTCTATTACCTTCAGCATTGCTGTGGTTTTTCGAATGGAGCGAGTCAATTTGAAACGAGTGCGAGGGGTTGCTAAGGTCATTGGAACCTTGGTGACCTTCGCCGGAGCTTTGGTTATGACGCTTTACAAAGGCCCAATAGTGGATTTCTTTTGGACTCGGAAAACCAACCACCTTGTTCATAGTGCCTCCGCCGCTTCCTCCGCCGCCAATCAGCACTGGGTGGCAGGAACTCTGTTCATCCTTCTCGCTTGTGTGGCTTGGTCTTGTTTCTATGTATTACAATCTGTGACAGTGAAGAGATACCCAGCGGAGCTATCACTTTCGACATTGATATGCATGGCTGGTGTGGTTCAAACCACAGTGATAGCAGTGGCCTTTGAGCATCGTGCTAGCTCATGGGCGGTGGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGCTCAGGAATTACATATTACTTCCAAGCTCTTGTAATGAAGACTAGAGGCCCTGTGTTTGTGACGGCTTTCAACCCTTTGTGTATGGTTGTTGTCACTATCATCTCCTCCATTATTCTCGCCGAGAAGATCCATCTTGGAAGCGTTATTGGAGCCATTATCATAGCAATTGGGCTTTATTCAGTTGTTTGGGGCAAAAGCAAGGATTATTCCACCGCCGCTGGCCACCTTGAGAAGTCTAACGCCGCCGAGCCGGAGCTCCCAATTACGGCCTCTAAACCCCCCGCCGAACAAGATGCTAATGAACTTCATTAA 1110 48.2 MMGMNSNFMSKLKPYILVVCLQFGMAGIYVISMATLNGGMSRYVLIVYRNVVAALFLAPFALIFERKTRPKMTLPVAMQIMVLGFLEPVLDQGFGYLGMSYTSASFTSAIMNAVPSITFSIAVVFRMERVNLKRVRGVAKVIGTLVTFAGALVMTLYKGPIVDFFWTRKTNHLVHSASAASSAANQHWVAGTLFILLACVAWSCFYVLQSVTVKRYPAELSLSTLICMAGVVQTTVIAVAFEHRASSWAVGWDSRLLAPLYTGIVGSGITYYFQALVMKTRGPVFVTAFNPLCMVVVTIISSIILAEKIHLGSVIGAIIIAIGLYSVVWGKSKDYSTAAGHLEKSNAAEPELPITASKPPAEQDANELH 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18212099 18216079 + CmoCh04G024630.1 Cmo04g02463 381438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02463 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Cmo04g02463 369 PANTHER WAT1-RELATED PROTEIN 12 348 IPR030184 GO:0016021|GO:0022857
Cmo04g02463 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Cmo04g02463 369 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020|GO:0016021
Cmo04g02463 369 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Cmo04g02463 369 MobiDBLite consensus disorder prediction 346 369 - -
Cmo04g02463 369 PANTHER WAT1-RELATED PROTEIN 12 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02463 Cmo-Chr4:18212099 Cmo03g00455 Cmo-Chr3:5080508 1.20E-121 dispersed
Cmo04g02463 Cmo-Chr4:18212099 Cmo04g02464 Cmo-Chr4:18217217 4.85E-122 tandem
Cmo04g02463 Cmo-Chr4:18212099 Cmo09g00792 Cmo-Chr9:4054770 6.29E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02463 - - csv:101217521 576.244