Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g02464 | ATGATGAAAATAAGGAAGGCTTATTTTGCTGTCGTGTTCCTGCAGGCTTCAATTGCAGTTATGTACACCATTGTCGCTATTTCTCTTAAGCATGGCCTTAACCATTTTGTGTTTTCTGTCTATCGCCATGCTGTCGCCACCGTCGTTCTCGCCCCCTTCGCTCTCATTCTCGAAAGGAAAACGAGACCTCAAATGACACTACCCGTCTTCTGGAGAATTTTGTTGCTCGGTTTTCTAGAGCCAGTTCTCGACCAGAATTTATACTATTTGGGAATGAAGTACACATCGTCAACATTTGCGTCGGCTGCCATCAACATCCTTCCGGCCATAACCTTCATCCTGGCCGTCATTTTCAGGCTGGAGATCGTCAACATGAAGAAAAAACATGGCTTAGCGAAGACAGCCGGAACTGTAATAGCGATCACCGGAGCCATGGTTATGAGCCTGTACAAAGGGCCGGCTTTCAACTTCCTTCCGAGCACTGGCCGTAGCGAAATGAGCCACACCGAAACGGCGACAGACCGGCACTGGGTCTCCGGCAGCATCTTCGTCTTTGTCAGTTGCTTCTGCGCGTCCGCCTTTTATATCTTACAGTCCATGACATTGAAAATGTACCCTGCCGGGATTTCGCTGGCAGCTTTGATATGCCTGACCGGAACCGTGGAAGGCGGCGCCGTCACTCTCGCCGCCGAACGTCACATGATGGTCTGGATTGTCGGCTGGGATTCCAGACTTCTAGCCATCCTTTACTCAGGAATAGTATGCTCTGGAATTGCATATTACGTTCAAGGAGCAGTGATGAAGGAACGCGGCCCGATTTTTGTGACGTCATTCAGCCCTCTCTGTACGGTCATCACGGCGGCGCTCAGCTCCATTTTCTTGGCCGACAAGGTTCATCTCGGAAGTTTGATTGGGGCAGTGATCGTGATGTTTGGATTGTATACTTTGATTTGGGGCACAAGTATAGATTTTGAAACTTCAAAACAATCTAATCACGTCACCCAATTGCCGATCACCGGTGACGTTGCCGGGAAGATGGTAGACGGTCCCGCCAAGCCTCCAGTTGTGTAG | 1071 | 49.67 | MMKIRKAYFAVVFLQASIAVMYTIVAISLKHGLNHFVFSVYRHAVATVVLAPFALILERKTRPQMTLPVFWRILLLGFLEPVLDQNLYYLGMKYTSSTFASAAINILPAITFILAVIFRLEIVNMKKKHGLAKTAGTVIAITGAMVMSLYKGPAFNFLPSTGRSEMSHTETATDRHWVSGSIFVFVSCFCASAFYILQSMTLKMYPAGISLAALICLTGTVEGGAVTLAAERHMMVWIVGWDSRLLAILYSGIVCSGIAYYVQGAVMKERGPIFVTSFSPLCTVITAALSSIFLADKVHLGSLIGAVIVMFGLYTLIWGTSIDFETSKQSNHVTQLPITGDVAGKMVDGPAKPPVV | 356 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 18217217 | 18219644 | + | CmoCh04G024640.1 | Cmo04g02464 | 381439 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g02464 | 356 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 41 | 151 | - | - | |
| Cmo04g02464 | 356 | PANTHER | WAT1-RELATED PROTEIN | 5 | 338 | IPR030184 | GO:0016021|GO:0022857 | |
| Cmo04g02464 | 356 | Pfam | EamA-like transporter family | 12 | 148 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo04g02464 | 356 | Pfam | EamA-like transporter family | 179 | 317 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo04g02464 | 356 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 231 | 320 | - | - | |
| Cmo04g02464 | 356 | PANTHER | WAT1-RELATED PROTEIN | 5 | 338 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo04g02464 | Cmo09g00792 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g01443 | Cmo-Chr1:11262018 | Cmo04g02464 | Cmo-Chr4:18217217 | 5.40E-80 | dispersed | |
| Cmo04g02464 | Cmo-Chr4:18217217 | Cmo09g00792 | Cmo-Chr9:4054770 | 3.26E-140 | dispersed | |
| Cmo11g01704 | Cmo-Chr11:12093252 | Cmo04g02464 | Cmo-Chr4:18217217 | 1.20E-32 | dispersed | |
| Cmo04g02463 | Cmo-Chr4:18212099 | Cmo04g02464 | Cmo-Chr4:18217217 | 4.85E-122 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g02464 | - | - | mcha:111011925 | 503.442 |