Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02514 ATGGTGATGAAGATGAAACCCATCATGGCATTCTTGGTGATGATGAACATAGCCATATTATCAACACCCTTGGCCGTGGCAGCATCTCAAGCCTTACCCGGGTGTGAAGAACGGTGTGGCGACGTGCACATTCCATATCCATTCGGCATCAAAGAAGGGTGCTATCTCAATCAAAATTTCTCGATCGCTTGCGACAAAACCGATCGCAACGGACCTCCAAAGGCGTTTCTAATGCATACCAATATTAGTGTTATGAATATATTTACCAACGGTGAGCTTCACGTGTTGCAGCCGATAGTGCGAAATTGTTATAGCGACGGAGGTAGTTATTTAGATATGAACGATTCGTATCTTTCTGTGCCGGACATGTACCCACTTTCTCGTTCCAAAAATAAGTTCATTACCATTGGGTGCAATCATGTTGGGTTAATCTTGGGGGATTACTTAGGGGGTGACTTTGAAAGTGGGTGTATTTCGATGTGTACAAAGAAAAGTAGTGTAGCTGATGGGTCGTGTTCTGGGAGTGGGTGCTGTCAGTTGGAGATTCCAAAAGGGTTAACCAATTTGAGATTGGCGGTGGGTGAGTTGTTGAATTACACTGAAATACCGAAATTGAGTCCCTGTGGGTATGCTTTTATAATTGAAGCTGAGAGGTTCCGGTTTTTGTCAAGTTATATTGATAAGTTTGAAGACGAGAAAGTTGTGGTTGTGCTTAGTTGGGGCATTAGAAACGAATTAAAGTTTGAATGTGGATCAAACACCGCAAGGATTAGTATCTTTAATGGAACTCAATATGGTTGCCAATGCTTGGATGGAATTGGGTTAGGCCTCGTAGTTCTACTAATTGCCATCACAACCATATACTTATGCTATAAAAAGTTGAAGTTCATCAAACAAAAACAGCGTTTTTTCCACAAAAACGGAGGCTTTGTGCTTCAACGACAGCTTTCTCAATGCAATTCACCTAAAGACATCGTAAGAATCTTCAGCCAAGAAGAGTTGGAGAAGGCCACCAACAACTACGCCAAAGACACCATTGCTGGCAAAGGTGGCTACGGTACCGTTTACAAAGGTGTCTTGGACGATGGACTCACCGTTGCAATCAAGAAATCAAAATTCATGGACGAATCCCAAACATCCCAATTCATCAATGAAGTCGTTGTTCTTTCCCAAATCAACCATCGAAACGTGGTCAAGCTCTTAGGGTGCTGTTTAGAGACCCAAGTCCCATTGTTGGTGTACGAGTTCGTCACCAACGGCACCCTCTTCGATCACATCCATGACACTACCAAACGCGTCCCTCTTTCTTGGGAAGCTCGCTTGAGAATCGCTTCGGAAACAGCCGGTGTCATTTCGTATTTGCATTCTTCGGCTTCTATTCCCATCATCCATAGAGATATCAAGACCACCAACGTACTTTTAGACGATAATTACACTGCAAAGGTGTCTGATTTTGGTGCTTCCAAGTTGGTTCCTATGGATCAAACTCAGCTAACTACGCTCGTGCAAGGGACTCTCGGGTACTTAGACCCTGAGTACTTATTGACGAGCGAGTTAACTGAGAAGAGTGATGTGTATAGCTTTGGAATTGTGCTTCTGGAGCTTATAACGGGGAAGAAAGCGGTGAGGTTTGATGGGCCGGAAGAAGATCGAAATCTAGCCATGTATGTCCTTTGTGCAATGAAAGAAGACCGTTTTGAAGAAGTGGTGGATAAGGGAATGGTGAGTGAGGCCAACTTTGAGCAAATAAAAGAAGTGGCTAAGCTAGCGAAAGAGTGTGTGAGAATCAAAGGGGACGAGAGGCCGGACATGAAGGAAGTGGCTATGGAGTTGGAGGCGCTGCGAGCAACGAAGGGTGAGCATTCATGGGCCAATGTTAGGTTATCCGCCGCACAAGAGTCGAGCCCATTTGTTGAGAGTGGAAGTATGGGCGCTGTGGATGATAGCATAAAGCTGGAATTGCCACATGTCGAACATGGTAGATGA 1986 44.51 MVMKMKPIMAFLVMMNIAILSTPLAVAASQALPGCEERCGDVHIPYPFGIKEGCYLNQNFSIACDKTDRNGPPKAFLMHTNISVMNIFTNGELHVLQPIVRNCYSDGGSYLDMNDSYLSVPDMYPLSRSKNKFITIGCNHVGLILGDYLGGDFESGCISMCTKKSSVADGSCSGSGCCQLEIPKGLTNLRLAVGELLNYTEIPKLSPCGYAFIIEAERFRFLSSYIDKFEDEKVVVVLSWGIRNELKFECGSNTARISIFNGTQYGCQCLDGIGLGLVVLLIAITTIYLCYKKLKFIKQKQRFFHKNGGFVLQRQLSQCNSPKDIVRIFSQEELEKATNNYAKDTIAGKGGYGTVYKGVLDDGLTVAIKKSKFMDESQTSQFINEVVVLSQINHRNVVKLLGCCLETQVPLLVYEFVTNGTLFDHIHDTTKRVPLSWEARLRIASETAGVISYLHSSASIPIIHRDIKTTNVLLDDNYTAKVSDFGASKLVPMDQTQLTTLVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELITGKKAVRFDGPEEDRNLAMYVLCAMKEDRFEEVVDKGMVSEANFEQIKEVAKLAKECVRIKGDERPDMKEVAMELEALRATKGEHSWANVRLSAAQESSPFVESGSMGAVDDSIKLELPHVEHGR 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18516963 18520169 - CmoCh04G025140.1 Cmo04g02514 381489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02514 661 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 272 IPR045274 GO:0007166
Cmo04g02514 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Cmo04g02514 661 Pfam Wall-associated receptor kinase galacturonan-binding 35 91 IPR025287 GO:0030247
Cmo04g02514 661 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 272 635 - -
Cmo04g02514 661 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 272 - -
Cmo04g02514 661 SUPERFAMILY Protein kinase-like (PK-like) 322 611 IPR011009 -
Cmo04g02514 661 SMART serkin_6 341 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02514 661 Pfam Protein tyrosine and serine/threonine kinase 347 611 IPR001245 GO:0004672|GO:0006468
Cmo04g02514 661 Gene3D Transferase(Phosphotransferase) domain 1 417 633 - -
Cmo04g02514 661 ProSiteProfiles Protein kinase domain profile. 341 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02514 661 CDD STKc_IRAK 348 614 - -
Cmo04g02514 661 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
Cmo04g02514 661 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 272 635 IPR045274 GO:0007166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02514 Cmo-Chr4:18516963 Cmo04g02517 Cmo-Chr4:18535619 6.80E-151 dispersed
Cmo07g01055 Cmo-Chr7:5370828 Cmo04g02514 Cmo-Chr4:18516963 7.15E-95 dispersed
Cmo04g02514 Cmo-Chr4:18516963 Cmo04g02515 Cmo-Chr4:18523453 1.59E-150 tandem
Cmo15g00654 Cmo-Chr15:3163820 Cmo04g02514 Cmo-Chr4:18516963 2.67E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74306 PF07714 PK_Tyr_Ser-Thr 1.50E-47 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02514 - - cmos:111460588 743.806