Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g02531 | TTTCTCTTTCTTTGCTCTCGTCTAGCCGTAGGAGCATCCACCGCCGCCGTTACAAAGTCCAACTCTTCCACGGAGGAAGCTCTGTTTCCTCTACCCTCTCCCTCTTCTCCCCCGCTTGGGGATGCCGATCAAGAGACCACTCTACAACCGCCTGAGCCATCTTCCTCTCCACCGCCGCCGGTAGTTTCAGAAATTATAATGTTCTCGAGGGATTCTAACGTTCTATTCAGTGGCGGCGGTATCAGTTTTCTCCATGGAAACCATACTGGAAAGTTTAGCTATGGCTATTCTAGTTTCAAGGGTAAAAGGGCATCAATGGAGGACTTCTATGAAACTAGAATTTCTGAAGTCGATGGGAAGATGGTTGCTTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAAGACAGCTATTACTGAGGTTTTTAGACAGACGGATGCAGACTATATTAATGAAGAGAGAGGTCAGCAGAAAGATGCTGGGTCAACTGCATCAACTGCTGTCCTGTTAGGGGATCGTCTCCTTGTTGCTAATGTTGGGGATTCGAGAGTAGTCGCGTCTAGAGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAGCCTGATCGATCAGATGAACGGCGAAGGATTGAAGATGCTGGAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCACGCGCCTTTGGAGATAAGCTACTCAAACGATACGTGGTTGCTGATCCCGAAATTAAGGAAGAAGAAATCCCCAGTGTAGACTTTATAATTATTGCAAGCGATGGACTTTGGAATGTCATATCAAATGAGGAAGCTGTATCATTAGTGCAACACATCCAAGATGCAGAAATGGCTTCAAGAAAACTCATTCAAGAAGCTTATGCACGAGGGAGTACCGACAACATTACGTGTGTCATCGTACAATTTGGTTTATCATAA | 1008 | 45.04 | FLFLCSRLAVGASTAAVTKSNSSTEEALFPLPSPSSPPLGDADQETTLQPPEPSSSPPPPVVSEIIMFSRDSNVLFSGGGISFLHGNHTGKFSYGYSSFKGKRASMEDFYETRISEVDGKMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTKTAITEVFRQTDADYINEERGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERRRIEDAGGTWRVGGILAVSRAFGDKLLKRYVVADPEIKEEEIPSVDFIIIASDGLWNVISNEEAVSLVQHIQDAEMASRKLIQEAYARGSTDNITCVIVQFGLS | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 18596607 | 18601152 | - | CmoCh04G025310.1 | Cmo04g02531 | 381506 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g02531 | 335 | PANTHER | PROTEIN PHOSPHATASE 2C 11-RELATED | 56 | 334 | - | - | |
Cmo04g02531 | 335 | SMART | PP2C_4 | 83 | 330 | IPR001932 | - | |
Cmo04g02531 | 335 | SUPERFAMILY | PP2C-like | 89 | 332 | IPR036457 | - | |
Cmo04g02531 | 335 | PANTHER | ALPHABET, ISOFORM E-RELATED | 56 | 334 | - | - | |
Cmo04g02531 | 335 | ProSitePatterns | PPM-type phosphatase domain signature. | 124 | 132 | IPR000222 | GO:0043169 | |
Cmo04g02531 | 335 | CDD | PP2Cc | 92 | 332 | IPR001932 | - | |
Cmo04g02531 | 335 | ProSiteProfiles | PPM-type phosphatase domain profile. | 93 | 332 | IPR001932 | - | |
Cmo04g02531 | 335 | MobiDBLite | consensus disorder prediction | 23 | 61 | - | - | |
Cmo04g02531 | 335 | Gene3D | - | 84 | 334 | IPR036457 | - | |
Cmo04g02531 | 335 | Pfam | Protein phosphatase 2C | 94 | 325 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02531 | Cmo15g00643 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02531 | Cmo-Chr4:18596607 | Cmo09g00390 | Cmo-Chr9:1719359 | 2.25E-121 | dispersed | |
Cmo16g00043 | Cmo-Chr16:187305 | Cmo04g02531 | Cmo-Chr4:18596607 | 1.37E-33 | dispersed | |
Cmo18g01351 | Cmo-Chr18:12755649 | Cmo04g02531 | Cmo-Chr4:18596607 | 1.92E-33 | dispersed | |
Cmo17g00505 | Cmo-Chr17:4601619 | Cmo04g02531 | Cmo-Chr4:18596607 | 7.27E-28 | transposed | |
Cmo20g00992 | Cmo-Chr20:5681516 | Cmo04g02531 | Cmo-Chr4:18596607 | 4.04E-26 | transposed | |
Cmo15g00643 | Cmo-Chr15:3121936 | Cmo04g02531 | Cmo-Chr4:18596607 | 1.92E-173 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g02531 | K17506 | - | csv:101220053 | 484.952 |