Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02561 ATGGACCCCAACAAGGTAAACCTAAGCAATTTGGAGCAACAATCCCCCTCCGACATCGAAACCAAGCAATTCGACTACTCCAAACGCGCCCAATGGCTACGTGCAGCCGTGCTCGGTGCCAACGACGGGCTCGTCTCGACCGCGTCTCTCATGATGGGAGTTGGAGCCGTGAAACAAGACATCAAGGCCATGATCCTCACCGGCTTTGCCGGGTTGGTTGCCGGTGCGTGTAGTATGGCGATCGGCGAGTTCGTGTCGGTTTACTCACAATTAGACATTGAAGTAGCTCAAATGAAGAGAGAAAAGTTGCAAAGAGGTAGCCATCTAGATGGGCAAAGCCAAAGCGGCCAAGAGAGCAAAGGTAATGAAAAGCTGCCTAACCCACTCCAAGCCGCTATAGCCTCTGCCTTGGCTTTCTCTATTGGAGCAATGGTGCCATTGTTGGCTGCTTCCTTTATAAGAGAATATAAGGTAAGGCTCGGCGTGGTCGTGGCAGCAGTAACGTTGGCTCTCCTTGCGTTCGGGTCGTTGGGCGCCGTCCTTGGAAAAGCATCACCGGTTAAGTCATCCATCCGAGTGTTGGTTGGAGGTTGGCTAGCCATGGCTATAACCTTCGGGTTAACAAAGCTAATCGGAGTAAGTGGACTCTAG 651 52.07 MDPNKVNLSNLEQQSPSDIETKQFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKLQRGSHLDGQSQSGQESKGNEKLPNPLQAAIASALAFSIGAMVPLLAASFIREYKVRLGVVVAAVTLALLAFGSLGAVLGKASPVKSSIRVLVGGWLAMAITFGLTKLIGVSGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18762840 18763490 + CmoCh04G025610.1 Cmo04g02561 381536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02561 216 Pfam VIT family 33 105 IPR008217 GO:0005384|GO:0030026
Cmo04g02561 216 Pfam VIT family 120 208 IPR008217 GO:0005384|GO:0030026
Cmo04g02561 216 MobiDBLite consensus disorder prediction 104 125 - -
Cmo04g02561 216 MobiDBLite consensus disorder prediction 108 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02561 Cmo-Chr4:18762840 Cmo15g00932 Cmo-Chr15:4772103 3.98E-06 dispersed
Cmo09g01089 Cmo-Chr9:5974664 Cmo04g02561 Cmo-Chr4:18762840 7.30E-103 transposed
Cmo19g00333 Cmo-Chr19:2796842 Cmo04g02561 Cmo-Chr4:18762840 9.69E-89 transposed
Cmo15g00607 Cmo-Chr15:2949497 Cmo04g02561 Cmo-Chr4:18762840 7.91E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02561 K22736 - csv:101204048 341.273