Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g02613 | ATGGCGTCGGATTGGCCGCTCTTGATTGTATCTCCAAGAACATCGAAAACTACATCTCACGATCTACAAAAACAGGATCCGAACCAACCTGGATTGTTCTTGGCTATGAATGAGAACTTAGCGAGTACTGAACTAGGTCACCGCGCTTTCTCGCGGCGAAGTCAATCGTCGCTACAATCGAAATCCTCAATTCGCGAAGTGAGTTCTAGTGATGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCCGATTCTGAAGCACTGAGCTTATCACAGAAGGAGATCAATGACGAAGATGCGAGGTTGATTTACATCGATGATCCTGAGAAGACAAACGAGAAGTTCGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTAACTTTTCTACCGAGAAATCTGTTTGAACAGTTTCATAGAATTGCTTATATATATTTCCTAGCCATTGCCGTTCTTAATCAACTTCCTCAGCTTGCCGTTTTTGGTCGAACAGTATCTATTTTGCCTTTAGCTTTTGTGCTTCTTGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAGATTGAGAACAATAGATTAGCTTCAGTTTTGGTTGATGGTCAGTTTCATGACAAGAAATGGAAGGATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGGTACCATTCCTTGTGATATGGTGCTTCTTTCTACTAGTGATTCCACAGGGGTTGCTTATGTGCAGACCTTGAATTTGGACGGTGAATCGAATTTGAAAACGAGGTATGCGAAACAGGAGACGATGTCGAAAATGCCCGATAAGGAGAAGATTGTTGGGTTGGTTAAATGTGAGAAACCCAATAGGAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGACTTTCGCTTGGACCTCCAAACATTGTTCTTCGAGGCTGTGAGCTCAAGAACACGAGCTGGGCGGTTGGCGTTGCTGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAATAGTTCTGGAGCTCCGTCGAAAAGAAGTCGACTCGAGACTTGTATGAATGTGGAGATTATTATGCTCTCTTTCTTTCTCATTGCTTTGTGTATAGTTGTTTGTGTTCTTGCTGCTGTTTGGTTCTTTAGAAACAGGGAAGATTTGGATGTTTTGCCTTATTTCAGGAATAAGGATTTCTCAAAAGATCCACCTGAAACCTATAACTATTATGGATGGGGATTGGAGGCCTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCTATTTCACTTTACATTTCGATGGAGCTGGTTCGTGTTGGCCAGGCTTATTTCATGATTCGAGACGTTCAAATGTACGATGAAACATCAAATTCTAGATTTCAGTGTCGAGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTTTTTTCAGACAAAACGGGTACTCTTACTGAGAATAAGATGGAGTTTCGATGTGCTAGCATCACAGGGGTCGATTATGCAGGTGAAAGTACCGGCCCCCTCGACGAGCAGATTGGATACTCGGCTCGAGTGAATGGAAAGGTTTTGAGACCGAAAATGGCTGTCAAAACCGACCCCGAGCTTCTACAGTTATCAAAAAGTGGAAAGCACACCAAGAATGGAAGATATATTCATGATTTCTTCCTGGCATTAGCTGCTTGCAATACCATTGTTCCTCTTATTACAGAAACTTCTGATCCTTCAGTGCAATTAGTTGACTACCAAGGCGAGTCCCCGGATGAACAGGCGTTGGTTTATGCTGCTGCGGCATACGGTTTTATGCTGATCGAACGAACCTCTGGTCATATAGTTATCGACATACATGGTTCAAAAGAAAGATATAATGTTTTGGGAATGCACGAGTTCGATAGCGACAGGAAGCGGATGTCGGTGATATTGGGGTGTCCCGACATGTCCTTCAAAGTATTTGTAAAAGGTGCTGATAACTCCATGTTCAAGGTGATGGGTGGAAATATGAACACGAGTATCATTCAAGCCACTAAAGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGACGAAAGAACTCAGCTCTTCTGACTTTGATAAATGGCACTTGATGTTTGAGGAAGCAAGCACTGCGCTGATCGGCAGAGCAGCTAAGCTTCGCAAGGTTTCGAGTAGCATAGAAAACAATTTATCCATATTGGGGGCCTCTGGCATTGAAGATAAGTTACAAAAAGGTGTTCCAGAAGCTATAGAAGCTTTAAGAATGGCAGGCATTAAAGTATGGGTTTTGACTGGGGATAAGCAAGAAACAGCCATATCAATAGGTTACTCCTCCAAGCTCTTGACAAACAAGATGACCCAAATTATCATTAACAGCAACTCGGTGGATTCATGCCAAAGGAGTTTAGAAGATGCAATAATTATGTCGAAAAAGCTTGCTACTGCGTCGGGGGTTACACTGGATAGCGAAGGACGTAGTGAAGCTATAACGGCTTCGGTTGCGTTGATCATTGATGGTAGCAGCCTTGTTCATATTCTTGACAGTAGACTTGAAGAACAGCTTTTCCAACTATCTTGTCACTGTTCGGTGGTGTTATGCTGTCGAGTTGCTCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGAGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCAAATGACGTGTCGATGATCCAAAAGGCGGATGTGGGTGTCGGTATCAGCGGTCTAGAGGGTCGACAAGCTGTCATGGCGTCGGATTTCGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGAATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTGCTTGTTCTCTTTTGGTACGTGCTCTTCACCGGTTACTCGTTGTCGACCGCGATCAACCAATGGAGCAGTGTACTCTACTCTATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAATTCTTGACAAAGACTTAGGAAGAAGGACCCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAAGAGAGCTACAACTCTGGCTTGTTTTGGTTAACAATGGTCGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTTCCTTCTGGGCTACCACCGTCGACATTTCAGGCCTCGGAGATCTCTGGCTACTCGCTACGGTCATCGTCGTCAACTTACACTTGGCAATGGATGTGTTTCGATGGTATTCCATCACCCATGCCGTGATTTGGGGATCCACTCTCGCAACAGTCATTTGCGTCATCATTCTTGATTCGATATTGTCACTTCCCGGTTACTGGGCGATATATCACGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTATCGATCGTCGTTGTAGCGTTACTTCCTCGGTTCGTCGTAAAGTACCTTTATCAATATTATAGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAATTTGGAAGGATAAGAGAGATGGGAGTTGTACAAACAGAGATGATCCCAGTCCTCAACAATCCTTCACAACTATGA | 3633 | 43.27 | MASDWPLLIVSPRTSKTTSHDLQKQDPNQPGLFLAMNENLASTELGHRAFSRRSQSSLQSKSSIREVSSSDDFGSRPVRHGSRGADSEALSLSQKEINDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLAIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFHDKKWKDIRVGEIIKIGANGTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLVKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETCMNVEIIMLSFFLIALCIVVCVLAAVWFFRNREDLDVLPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDVQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASITGVDYAGESTGPLDEQIGYSARVNGKVLRPKMAVKTDPELLQLSKSGKHTKNGRYIHDFFLALAACNTIVPLITETSDPSVQLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGSKERYNVLGMHEFDSDRKRMSVILGCPDMSFKVFVKGADNSMFKVMGGNMNTSIIQATKAHLHSYSSKGLRTLVIGTKELSSSDFDKWHLMFEEASTALIGRAAKLRKVSSSIENNLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSVDSCQRSLEDAIIMSKKLATASGVTLDSEGRSEAITASVALIIDGSSLVHILDSRLEEQLFQLSCHCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLSTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSGLFWLTMVDTVWQSIAIFFIPLLSFWATTVDISGLGDLWLLATVIVVNLHLAMDVFRWYSITHAVIWGSTLATVICVIILDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFVVKYLYQYYSPCDIQIAREADKFGRIREMGVVQTEMIPVLNNPSQL | 1210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 19053509 | 19058683 | + | CmoCh04G026130.1 | Cmo04g02613 | 381588 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g02613 | 1210 | Gene3D | - | 174 | 346 | - | - | |
Cmo04g02613 | 1210 | MobiDBLite | consensus disorder prediction | 50 | 92 | - | - | |
Cmo04g02613 | 1210 | PRINTS | P-type cation-transporting ATPase superfamily signature | 489 | 503 | - | - | |
Cmo04g02613 | 1210 | PRINTS | P-type cation-transporting ATPase superfamily signature | 908 | 927 | - | - | |
Cmo04g02613 | 1210 | Gene3D | - | 746 | 948 | IPR023214 | - | |
Cmo04g02613 | 1210 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 491 | 497 | IPR018303 | - | |
Cmo04g02613 | 1210 | CDD | P-type_ATPase_APLT_Dnf-like | 121 | 1068 | - | - | |
Cmo04g02613 | 1210 | SFLD | C1.7: P-type atpase like | 473 | 959 | - | - | |
Cmo04g02613 | 1210 | SUPERFAMILY | HAD-like | 476 | 949 | IPR036412 | - | |
Cmo04g02613 | 1210 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 118 | 1174 | IPR023298 | - | |
Cmo04g02613 | 1210 | SUPERFAMILY | Calcium ATPase, transduction domain A | 202 | 343 | IPR008250 | - | |
Cmo04g02613 | 1210 | Pfam | Cation transport ATPase (P-type) | 597 | 673 | - | - | |
Cmo04g02613 | 1210 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - | |
Cmo04g02613 | 1210 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 936 | 1175 | IPR032630 | - | |
Cmo04g02613 | 1210 | MobiDBLite | consensus disorder prediction | 10 | 31 | - | - | |
Cmo04g02613 | 1210 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cmo04g02613 | 1210 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 83 | 1208 | - | - | |
Cmo04g02613 | 1210 | Pfam | Phospholipid-translocating ATPase N-terminal | 105 | 171 | IPR032631 | - | |
Cmo04g02613 | 1210 | Gene3D | - | 592 | 726 | IPR023299 | GO:0000166 | |
Cmo04g02613 | 1210 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 119 | 1183 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cmo04g02613 | 1210 | Pfam | E1-E2 ATPase | 205 | 447 | - | - | |
Cmo04g02613 | 1210 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 496 | 722 | IPR023299 | GO:0000166 | |
Cmo04g02613 | 1210 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 421 | 513 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo04g02613 | 1210 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 878 | 991 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo04g02613 | 1210 | SFLD | p-type atpase | 473 | 959 | IPR044492 | - | |
Cmo04g02613 | 1210 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 83 | 1208 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02613 | Cmo-Chr4:19053509 | Cmo07g01262 | Cmo-Chr7:6898040 | 0 | dispersed | |
Cmo15g00548 | Cmo-Chr15:2610755 | Cmo04g02613 | Cmo-Chr4:19053509 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g02613 | K14802 | - | csv:101212953 | 2167.89 |