Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02650 ATGGCGTCGTCCTCTTTATCCGATCACTACCTCCAACTTTTCTTCTCACTTATGGCCTTCGCACTCTCTGTACTCATCTTCTTCCGCATCCAAAAACGTATCTCCAAGAAACGGCTCAACCTCCCGCCGGGACCCCGCGGATGGCCGGTCGTTGGAAACCTCTTCCAGGTCGCCCGCACCGGCAAGCATTTCTTCGAATACATCGAAGACTTTCGCCTGATTTACGGCCCAATCTTCACTCTCCAGTTGGGCTCTCGCACCATGATCATCTTGTCCGGCGCCGACCTCATCCATGAAGCCCTAATCAAGCGCGGCCCTGCCTTCGCCAGCCGTCCTGCTGAGAATCCAACCCGAATCGTCTTCAGCTGCAACAAATTCTCTGTCAATGCCGCCGTCTACGGCTCCCTCTGGCGCTCCCTCCGCCGAAACATGGTCGAGAATATGCTCTCTTCCAGCAGCTTGAAAGAATTTCACGACGTTAGAAAAAACGCCATTGATAATCTCGTTGAACGCATCCGAGCCGACGCTGCCGCCAACGGTGGTGTTGTTTGGGTGTTGAAGAATGCTAGATTCGCTGTGTTCTGTATTCTCTTGGCGATGTGCTTTGGATTAGAAATGGACGAGGAATCGGTTGAGAAAATGGATCAAGTTCTTAAAACCGTTCTGATCACCGTCGATCCGAGAATCGACGATTTTCTCCCGATTTTGAGGCCTTTCTTCTCCAAGCAGAGGAAACGCGCCATGGAAGTGAGAAAAGAGCAAATCGAATTTGTCGTACAGTTCATCAATCGAAGGAAAAAAGCACTTCAAAATCCAGGATCAGACATTAACGCAACTTCATTTTCATACCTCGATACGCTCTTCGATCTCAAGGTCGACGGCCGGGAATCATCCCCAACAGACGCCGAATTAGTCACTCTCTGCTCCGAATTCCTCAACGGCGGCACAGACACAACGGCCGCCGCAATCGAATGGGGAATCGCAGAGCTAATCACAAACCCTAACATCCAGAACAAACTACACGAAGAAATCAAACAAACAGTAGGCGACAGAAAAGTAGAGGAATCAGATGTGGAGAAATTGCCGTACCTTCAAGCCGTAGTGAAGGAATTACTGAGAAAACATCCGCCGACGTACTTCACGCTGACGCATTCGGTGACCGAGGCGACAAAACTCGGCGGATACGACATTCCAGTGGAAGCGAACGTGGAGGTTTATTTGGCGGGAATCAGCAAGGATCCGGAAGTGTGGAAGAATCCGGAGAAGTTCGATCCGGAGAGATTCACGTCCGGTGAAGACGATGCGGATATGACAGGAGTGAAAGGAGTGAAGATGATTCCGTTCGGAGTGGGAAGAAGGATTTGCCCTGGATTGGGAATGGCGACGATTCACGTTCATGTGATGCTAGCGAGATTGGTTCAGGAATTTGAATGGAGTTCGTATCCGCCGAAGAGTAAAATAGATTTCACGAAGAAGTATGAGTTCACTGTGGTGTTGAAGAACTCTCTCAGAGCCATTGCCACAAACAGAGCTTAG 1536 49.93 MASSSLSDHYLQLFFSLMAFALSVLIFFRIQKRISKKRLNLPPGPRGWPVVGNLFQVARTGKHFFEYIEDFRLIYGPIFTLQLGSRTMIILSGADLIHEALIKRGPAFASRPAENPTRIVFSCNKFSVNAAVYGSLWRSLRRNMVENMLSSSSLKEFHDVRKNAIDNLVERIRADAAANGGVVWVLKNARFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFSKQRKRAMEVRKEQIEFVVQFINRRKKALQNPGSDINATSFSYLDTLFDLKVDGRESSPTDAELVTLCSEFLNGGTDTTAAAIEWGIAELITNPNIQNKLHEEIKQTVGDRKVEESDVEKLPYLQAVVKELLRKHPPTYFTLTHSVTEATKLGGYDIPVEANVEVYLAGISKDPEVWKNPEKFDPERFTSGEDDADMTGVKGVKMIPFGVGRRICPGLGMATIHVHVMLARLVQEFEWSSYPPKSKIDFTKKYEFTVVLKNSLRAIATNRA 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19269559 19271094 - CmoCh04G026500.1 Cmo04g02650 381625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02650 511 SUPERFAMILY Cytochrome P450 42 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cmo04g02650 511 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g02650 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 508 - -
Cmo04g02650 511 PANTHER CYTOCHROME P450 77A4 6 508 - -
Cmo04g02650 511 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00551 Cmo-Chr3:5505971 Cmo04g02650 Cmo-Chr4:19269559 6.91E-162 dispersed
Cmo04g02650 Cmo-Chr4:19269559 Cmo20g00936 Cmo-Chr20:4868601 1.32E-113 dispersed
Cmo15g00488 Cmo-Chr15:2228428 Cmo04g02650 Cmo-Chr4:19269559 0 wgd
Cmo04g01493 Cmo-Chr4:7650629 Cmo04g02650 Cmo-Chr4:19269559 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02650 K21995 - csv:101206763 878.626