Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02732 ATGGAGATTAGCTACGCATCACCTAGCGCGTCTAGTCTTGCTTCCTCTAATTCTGCCCTTTCATCCATGCCTTCCTCCACCCGACCGGTCAAGGTCATTCCCTTGCAGCATCCTAGTACGACGTCGTCGTCCTCGCCGGCCGGTGGTTATTCCGCTGGCGTTCTGGTGAAGAAATGGACGGGGAAGGTTAAGCAGATGACTTGGATTAACTGGATGGAGCTTCTGCTACCGTGCTCGCGGTGGATTAGAACGTATAAATGGCGGGAGTATTTACAGAGCGATCTCTTGTCCGGGATTACCATTGGTATCATGCTCGTCCCGCAGGCAATGTCTTATGCGAAATTAGCCGGGCTTCAACCAATATATGGACTTTATTCTGGTTTTCTCCCTTTGTTCGTCTATGCATTTTTTGGTTCTTCTCGTCAGCTTGCTGTTGGTCCAGTAGCATTGGTTTCTCTCCTGGTTTCTAATGTCTTGGGTGGAATTGTCAATTCATCTGAGGAACTATACACTGAACTTGCGATATTATTGGCACTCATGGTTGGAGTATTGGAATGTGTGATGGGGCTCTTGAGGCTTGGGTGGCTTATTCGCTTTATCAGTCACTCTGTAATCTCTGGCTTTACTACAGCTTCTGCCGTTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTATGATGTATCAAGAAGTAGCAAAATTGTGCCTCTAATTGAGAGCATAATAGCTGGAGCAGACGGGTTCTTGTGGGCACCTTTCATAATGGGATCAGTTATCCTTGCAGTACTTCAAATCATGAAGCATCTGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCCCTTACAGCAGTTGTTATGGGTACAACATTGGCGAAAGTATTGAATCTGCCATCCATTTCATTGGTTGGAGACATTCCCCAAGGCCTTCCGAAGTTTTCTGTTCCTAAAAGTTTTGAGCATGTGAAGTCGTTGATTCCAACTGCCTTTCTGATCACAGGAGTAGCTATATTGGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAACGGGTACGAGTTAGATTCAAATCAGGAGTTATTTGGTCTTGGAGTATCCAATGTTGTTGGCTCGTTCTTTTCAGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCTGTGAACCACGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAATCGTTATGGGCGGTGCCCTTCTTTTCTTGACTCCATTGTTTGAGCACATACCTCAGTGTGCTTTGGCCGCCATTGTGATTTCCGCTGTAATAACTTTGGTGGATTACGACGAGGCTATTTTTTTGTGGCGTATAAATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTACTACGTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGCCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACAACTGTGTACAGAAATATTCAACAGTATCCTGAGGCATATACTTACAATGGAATTGTGATTGTTCGGATTGATGCACCAATTTATTTTGCAAACACGAGTTACATCAGTGACAGGCTACGTGAATATGAAGTTGAAGTGGACCGATCTACTGGCCGTGGGCCAGATGTTGAAAGAGTCTATTTCGTGGTTATAGAGATGGCACCTGTTACTTACATAGATTCAAGTGCTGTCCAGACTCTAAAAGATTTGTATCAAGAGTACAAACTACGTGATATTCAGATTGCCATTTCCAATCCAAATCGAGATGTTCTACTTACATTTTCAAGATCTGGCGTTGTTGAGCTTATCGGGAAGGAGTGGTTTTTTGTTAGAGTTCATGATGCAGTCCAAGTTTGTCTTCAGCATGTGGAGAGCCTAAAGGAAACAACCAAGAGACCAGTTTCTTCTCCAAATGATGCATCGACCTATATCCAAAGGTTAGTGAAGTCTAGAAATGAGGATTTATCAGTGAGCCAATTAGAGTCAGGCTTCCAAAAGCTTCCAAGTTCTAATGAAATTGACCCTCAATTGGAACCATTACTGTCCCGAAATCCTTGA 2115 43.69 MEISYASPSASSLASSNSALSSMPSSTRPVKVIPLQHPSTTSSSSPAGGYSAGVLVKKWTGKVKQMTWINWMELLLPCSRWIRTYKWREYLQSDLLSGITIGIMLVPQAMSYAKLAGLQPIYGLYSGFLPLFVYAFFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGVLECVMGLLRLGWLIRFISHSVISGFTTASAVVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGADGFLWAPFIMGSVILAVLQIMKHLGKTRKHLRFLRVAGPLTAVVMGTTLAKVLNLPSISLVGDIPQGLPKFSVPKSFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIVMGGALLFLTPLFEHIPQCALAAIVISAVITLVDYDEAIFLWRINKKDFLLWVITAITTLFLGIEIGVLIGVGVSLAFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPIYFANTSYISDRLREYEVEVDRSTGRGPDVERVYFVVIEMAPVTYIDSSAVQTLKDLYQEYKLRDIQIAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLKETTKRPVSSPNDASTYIQRLVKSRNEDLSVSQLESGFQKLPSSNEIDPQLEPLLSRNP 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19784684 19793089 - CmoCh04G027320.1 Cmo04g02732 381707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02732 704 Gene3D STAS domain 494 642 IPR036513 -
Cmo04g02732 704 Pfam STAS domain 515 634 IPR002645 -
Cmo04g02732 704 PANTHER SULFATE TRANSPORTER 4.1-RELATED 47 673 - -
Cmo04g02732 704 PANTHER SULFATE TRANSPORTER 47 673 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo04g02732 704 SUPERFAMILY SpoIIaa-like 516 638 IPR036513 -
Cmo04g02732 704 MobiDBLite consensus disorder prediction 682 704 - -
Cmo04g02732 704 CDD STAS_SulP_like_sulfate_transporter 515 631 - -
Cmo04g02732 704 ProSiteProfiles STAS domain profile. 514 638 IPR002645 -
Cmo04g02732 704 MobiDBLite consensus disorder prediction 1 22 - -
Cmo04g02732 704 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Cmo04g02732 704 TIGRFAM sulP: sulfate permease 77 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo04g02732 704 Pfam Sulfate permease family 91 464 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02732 Cmo-Chr4:19784684 Cmo15g00746 Cmo-Chr15:3662569 6.66E-124 dispersed
Cmo04g02732 Cmo-Chr4:19784684 Cmo01g01470 Cmo-Chr1:11419047 3.39E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02732 K18059 - csv:101202870 1215.29