Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02756 ATGGAATTCGCCGACGAGCATACCGCCGGAGCCACCACCTCCAACTCCGACCGCCATAAGCCCTCCGACACCAGATACGGCGTTGACCTCTCATCCTCTGATAACGATACCGAAGATGCACATCCTGTTTTCTCTAACGTGCCTGCTTCACTTGCACCACCAGTTTCTCCGATCCTTCCTCTGCAAAGTAAATGTAATGTAGTAATTCAGGCTGATATGGATGATAAATTGGAGACCATACAAAATATATGTCAGAAAATTGTGGACACCACGAACTTATACTCATTTTCTAAATTGGATGATCATCAAGTATATTCCCTTATGAGGCTGAGGGAAATTTCTCATCGGGTTATTAATGACCGAGATTCAAGGGTGACAAAAAATGATGTGATTAGTGCTATGTGCTTTTACATCAACAGGATGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAGGATATCATATAAAGACCTAGACAGCCAGCAAGTGCAACAGCTATTGAGATTGAAAGAGCTTCTATGTGGGATTGTTGATGGAGCTAAAGATGTGGAGATTGAACCTTCCCATATTGTTGAACAGGGAATTGCAAATGATATGTGGACAACAGAGAGTCTAGAGGTCGAGCCAATTGACTCCAGCAATGATGATGTACTTCTTGGAGACGCACAAATTATAATGGTTGAAGTTGAACAGGCAGTGGCTGAGTCTAGGCTCGAGAATGAATATTGTGACCTGTCACATGTTAAGCACACTGTTAGTTGGCCACCACATGGTTGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACACTGGAACAGTCTTCACGAAATTACTCGCCTGCAGAGTTTCAACTTGTCATGCCAGTTTCTGTGGTAGATGAAATACTAGATATGGCTGCAAGCATCCTTCACAAGGAACCAAACTGTGTGGAAATTGACTGCCACGGAGAAGTTTCAAAAGTTGTTATAGTTGGGGACATTCATGGTCATTATCACGACTTACTTCACCTCTTTGAACTTGCTAACTTACCATCTAAGAGCCAATATTATGTTTTTAACGGCAATTATGTGGACAGAGGAGCATGGGGACTGGAGGTGCTTTTGGTCTTATTGGTGTGGAAGATCTTAATGCCTGATAGAGTATGTCTACTCCGTGGAAATCATGAAACCAGAATCTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAATGTATATCACAGGTGCTTGGAAACATTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGCATATACAACCCATGGAGGTTTATTTCGTAAGCCATGCAATCCTGATGTGCAGAATTACGAGGAAAGGAAGACACGCGAGCTGGAGATTGGATCCTTAGAAGACTTATCCAAGCTCGAAAGGTTTTTTGTTGATGTTCCAACTAAAGATGAAGATCCAAATATAATTTTGGCAGATGTATTATGGTCGGATCCTTCTAAAGTCGATGGTTTAAGGAAAAACCAAGCCAGAGGAGCAGGTTTATTGTGGGGTCCTGATGTGACTGAAGCATTCTTAAAGCTGTCTAATTTAAAGTTGATCATTAGATCACATGAAGGTCCAGATTCAAGGGACGGCAAAATTGATTTTGATGATATGATAATGGGTTATAGCTCAGATCATGACAGAGGATCAGGGAAATTATATACTCTATTTAGCGCTCCGGGTTTCCCACAGTTTGGTCGCAAGAGCTACAATAACGAGGGAGCATATGCTACTTTGAAGCATCCGGATTTTGAGATTCCAACGTTCCACACATTTAAAGCTGTAGATAAACCAAAGATAGACGTTTGCTATTTTGGCTGTGAAGGACATGATGTAGATTTAGACTTGACATTAATGGCTGATGCCGTCTCTTCTAAAAACTCTAGTCCTATTGAGGTTCATTCTGGGGTTGATTTTGAGGCATTGGGCATATTAAACCCACCCTCTTGGAGCGTTACAATGACAGATGATGTTACAGGTACCCAGAGTGTCAAGATTCCGAAGGCCCCCGTGGTAGAAGGGTTGCCTTTGCCACCAAGCATCGAGGAACCTCATAAGGCTGCGTATGAGTACTTCCTGGAGCTCATTGCAGGACTGAAGTTCATGCTTCAAACAACGGAAAATAAGGACAAGTTACCCATTCCTCATCAAAAATCTGGTTGGGGTGCCCAAAGGGAAATATCTCTGCTCTGTATAGCAGAGCGAATGAATTGA 2268 42.11 MEFADEHTAGATTSNSDRHKPSDTRYGVDLSSSDNDTEDAHPVFSNVPASLAPPVSPILPLQSKCNVVIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDHQVYSLMRLREISHRVINDRDSRVTKNDVISAMCFYINRMAGKCKDIVDILNRISYKDLDSQQVQQLLRLKELLCGIVDGAKDVEIEPSHIVEQGIANDMWTTESLEVEPIDSSNDDVLLGDAQIIMVEVEQAVAESRLENEYCDLSHVKHTVSWPPHGCLTLEWVVEMMKTLEQSSRNYSPAEFQLVMPVSVVDEILDMAASILHKEPNCVEIDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYYVFNGNYVDRGAWGLEVLLVLLVWKILMPDRVCLLRGNHETRICTSSYGFEKEVRTKYGEQGENVYHRCLETFKELPLAAIIAGKAYTTHGGLFRKPCNPDVQNYEERKTRELEIGSLEDLSKLERFFVDVPTKDEDPNIILADVLWSDPSKVDGLRKNQARGAGLLWGPDVTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSSDHDRGSGKLYTLFSAPGFPQFGRKSYNNEGAYATLKHPDFEIPTFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMADAVSSKNSSPIEVHSGVDFEALGILNPPSWSVTMTDDVTGTQSVKIPKAPVVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENKDKLPIPHQKSGWGAQREISLLCIAERMN 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19941647 19950802 - CmoCh04G027560.1 Cmo04g02756 381731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02756 755 Gene3D - 250 640 IPR029052 -
Cmo04g02756 755 Pfam Calcineurin-like phosphoesterase 323 544 IPR004843 GO:0016787
Cmo04g02756 755 SUPERFAMILY Metallo-dependent phosphatases 268 618 IPR029052 -
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 386 410 IPR006186 GO:0016787
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 423 449 IPR006186 GO:0016787
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 323 350 IPR006186 GO:0016787
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 570 586 IPR006186 GO:0016787
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 476 503 IPR006186 GO:0016787
Cmo04g02756 755 PRINTS Serine/threonine phosphatase family signature 353 380 IPR006186 GO:0016787
Cmo04g02756 755 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 76 729 - -
Cmo04g02756 755 SMART pp2a_7 290 614 IPR006186 GO:0016787
Cmo04g02756 755 ProSitePatterns Serine/threonine specific protein phosphatases signature. 387 392 IPR006186 GO:0016787
Cmo04g02756 755 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 76 729 - -
Cmo04g02756 755 MobiDBLite consensus disorder prediction 26 40 - -
Cmo04g02756 755 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02756 Cmo-Chr4:19941647 Cmo16g01342 Cmo-Chr16:9465540 1.02E-133 dispersed
Cmo06g00163 Cmo-Chr6:865841 Cmo04g02756 Cmo-Chr4:19941647 8.32E-16 dispersed
Cmo04g02752 Cmo-Chr4:19915452 Cmo04g02756 Cmo-Chr4:19941647 4.54E-07 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02756 K04460 - csv:101211172 1303.12