Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g02760 | ATGGCGGGAAAGGGCGAGGGTCCGGCCATCGGTATCGATCTCGGTACTACTTATTCCTGTGTTGGAGTTTGGCAGCACGATCGTGTTGAGATTATCGCCAATGATCAGGGGAATCGGACAACGCCGTCGTATGTTGCTTTCACTGATAGCGAGCGGCTTATCGGCGATGCTGCGAAGAACCAGGTTGCCATGAATCCTCTCAACACCGTCTTCGATGCGAAGCGGTTGATTGGAAGGAGATTCACCGATCCCACGGTCCAGAACGATATGAAAATGTGGCCGTTCAAGGTCATCGCCGGTCCAGGTGACAAACCCATGATTGTTGTCAACTACAAAGGCGAAGAGAAGCAGTTCGCTGCTGAGGAAATTTCATCCATGGTCCTCACGAAAATGCGTGAGATAGCAGAAGCTTACCTCGGTTCCTCCGTGAAGAACGCTGTCGTTACTGTCCCTGCTTATTTCAATGACTCTCAGCGTCAGGCCACCAAAGACGCAGGTGTCATTGCCGGCCTCAATGTTATGAGGATCATCAATGAGCCCACTGCGGCAGCCATCGCTTATGGACTAGACAAGAAAGCATCCAGTGTTGGCGAGAAGAATGTACTCATATTTGATTTAGGTGGAGGAACATTTGATGTCTCTCTTCTCACAATTGAGGAGGGTATTTTTGAAGTGAAGGCGACTGCCGGTGACACCCATCTCGGAGGTGAGGACTTCGACAACAGATTGGTTAACCATTTCGTACAGGAATTCAAGAGGAAGCATAAGAAGGACATCAGTGGAAATCCAAGGGCTCTGAGGAGATTGAGGACTGCTTGTGAAAGGGCGAAGAGAACCCTTTCATCCACTGCTCAAACTACAATTGAGATTGATTCTTTGTATGAAGGAATTGATTTCTACACAACCATCACTCGTGCTAGATTCGAGGAGCTCAACATGGACCTGTTCCGAAAGTGCATGGAGCCAGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGCTCTACGAGGATTCCTAAGGTGCAGCAGCTACTGCAGGATTTCTTCAATGGCAAGGAGCTCTGCAAGAGTATCAATCCTGACGAGGCAGTTGCTTATGGGGCTGCTGTTCAAGCTGCTATCTTGAGTGGTGAGGGAAATGAGAAAGTGCAGGATCTTCTTCTTTTGGATGTCACTCCTCTGTCTCTTGGCTTGGAGACTGCTGGAGGTGTGATGACAGTTTTGATCCCAAGGAACACCACCATACCCACAAAGAAGGAGCAAGTATTTTCCACATACTCAGACAACCAGCCTGGTGTTCTTATTCAGGTCTATGAGGGCGAGAGGACAAGAACCAGAGATAACAACTTGCTGGGCAAGTTTGAACTTTCCGGCATTCCTCCAGCTCCAAGAGGTGTTCCTCAGATCACTGTTTGCTTCGACATCGACGCCAACGGTATTCTAAACGTTTCCGCTGAGGATAAAACAACTGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCCAAAGAGGAGATTGAAAAACTGGTTCAAGAAGCAGAGAAGTTCAAGGCTGAAGATGAGGAACACAAGAAGAAAGTTGAATCAAAGAATGCTTTAGAGAACTATGCATACAATATGAGGAACACAATCAGAGATGAAAAGATAGGTGGTAAACTTGCCCCAGCAGACAAGAAGAAGATTGAAGATGCAGTTGAACAGGCCATTCAATGGCTAGACGGCAACCAGCTTGCAGAGTCCGACGAATTTGAGGACAAAATGAAAGAACTCGAATCTATTTGCAACCCCATCATAGCCAAGATGTATCAAGGTGGGGCTGACATGGGCGGCGTCGCAATGGACGATGATACTCCTCCATCAGGCGGCAGTGGCGCTGGTCCTAAGATCGAGGAAGTTGATTAA | 1947 | 47.71 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFTDPTVQNDMKMWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDGNQLAESDEFEDKMKELESICNPIIAKMYQGGADMGGVAMDDDTPPSGGSGAGPKIEEVD | 648 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 19963206 | 19966159 | - | CmoCh04G027600.1 | Cmo04g02760 | 381735 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g02760 | 648 | MobiDBLite | consensus disorder prediction | 624 | 648 | - | - | |
Cmo04g02760 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Cmo04g02760 | 648 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Cmo04g02760 | 648 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Cmo04g02760 | 648 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524|GO:0140662 | |
Cmo04g02760 | 648 | Gene3D | - | 546 | 619 | IPR029048 | - | |
Cmo04g02760 | 648 | Gene3D | - | 71 | 126 | - | - | |
Cmo04g02760 | 648 | Gene3D | - | 10 | 384 | - | - | |
Cmo04g02760 | 648 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 628 | IPR013126 | GO:0005524|GO:0140662 | |
Cmo04g02760 | 648 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 545 | IPR029047 | - | |
Cmo04g02760 | 648 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Cmo04g02760 | 648 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Cmo04g02760 | 648 | Coils | Coil | 514 | 541 | - | - | |
Cmo04g02760 | 648 | Gene3D | - | 192 | 366 | - | - | |
Cmo04g02760 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Cmo04g02760 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Cmo04g02760 | 648 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE | 1 | 628 | - | - | |
Cmo04g02760 | 648 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Cmo04g02760 | 648 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
Cmo04g02760 | 648 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 623 | IPR029048 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00923 | Cmo-Chr2:5674154 | Cmo04g02760 | Cmo-Chr4:19963206 | 0 | dispersed | |
Cmo03g00444 | Cmo-Chr3:5028811 | Cmo04g02760 | Cmo-Chr4:19963206 | 0 | dispersed | |
Cmo04g02760 | Cmo-Chr4:19963206 | Cmo15g00410 | Cmo-Chr15:1867166 | 0 | dispersed | |
Cmo14g01744 | Cmo-Chr14:13583561 | Cmo04g02760 | Cmo-Chr4:19963206 | 5.88E-90 | dispersed | |
Cmo16g00305 | Cmo-Chr16:1399820 | Cmo04g02760 | Cmo-Chr4:19963206 | 0 | dispersed | |
Cmo04g02755 | Cmo-Chr4:19938575 | Cmo04g02760 | Cmo-Chr4:19963206 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g02760 | K03283 | - | csv:101211905 | 1246.11 |