Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02813 ATGGCTTCCGATAATCTCGCCACCGTTTCCGGCGCCGACGACGAGAAGTTTGGATTTCGACGAGAGGAGATGTATCAGAGCAGCCTCGCTGGCACCGTCAGTGCCTATGATCGCCACGTTTTTCTCTGCTACAAGACTCCGGAGGCCTGGCCATCGCATCTCGAAGCATCTGATTCCGACGCCCTCCCTAGGCTCCTCTCTGCCGCTCTCAAAGCTCGCAAGGATGATATCTCCGTTAAGACGAAGCTGACAATGTTCGCTGGACGCGAGGAAACTGGATTTTCGGATGGAGATGTGTTGATTTTTCCCGAAATGGTCAAATACAGGTGGAATCTTGTCGTGGTTTTCGAAAATTTTCCGGCAGCTGATAAGCTGCTGGAAATATGCTTTGCCACTTCTCAAGGATATAATAATTTATTTATCAAATATTATGAAATTCTTGTGTTCATCTTTATTTCTTCTGTTGTTGACTTTAACTTCTTTGGTTTCCATGCACATAATGAAACTTTGGGTATTCTTCCTTGCTACCTTCCTGGATCAATTAATCTGATCGCTAGCAAATTACTACGATTGTGGTTTCTGTATCTAGTATATTTTATCAATTTTGAGGCCAAACAAGTTTTAGATCAGGGTTTAAAAGAGTCAGATGTGGATGGCTTCGTGGATGATGTGCTTGTGAATGATAAACAGTGGGCATCCGGAGTGCCAGAGGCTTTCACTGGCTCTCACGTGTTTGTGTGTGTTCATGCTAGTCGAGATCGGAGATGTGGTGTCTGTGGACCCGTTCTTGTTCAGAAGTTGGATGAGGAGATTGAGTTACGAGGACTTAAGGAACGAGTTTTTGTCAGTGCATGTTCACACATTGGAGGACACAAGTACGGATATGTAACTCCTGAAGATGTCTCTGAATTGTTTGAACGGCACATTGCAAAGGGCGAGGTCGTGGAAAGGCTTTTGAGAGGGCAAATGGGCACAAATCCCGAGGAAGGCAAAAAGGAAGATGAACTAAAGATTCCAAATGGAGAAGATACAAAGAAAAGCAAGGTTGAAATTGAAGAAAACAGCGGTCAAAGCAAAGTGGAAACAATAGCAGTAATGGATTCACTTGTTGCAGAGATGAAAGTTCAGGGAAAAGTAGTAGAATCGAAAACCAGTCGAAAGAAGCTTCAGAAGAGCAGGTACCCAAAGAAAGCTAATAAATTTTCTTGCTGGACAGGACAATGGGAACAAAGTGAAATTCTGGCTGCTGCTGCGATAATTGGAGCAGTGGCCACTGTCGCTGTTGCCTATAGCCTCTACAGGAGATCAGGATAA 1314 44.22 MASDNLATVSGADDEKFGFRREEMYQSSLAGTVSAYDRHVFLCYKTPEAWPSHLEASDSDALPRLLSAALKARKDDISVKTKLTMFAGREETGFSDGDVLIFPEMVKYRWNLVVVFENFPAADKLLEICFATSQGYNNLFIKYYEILVFIFISSVVDFNFFGFHAHNETLGILPCYLPGSINLIASKLLRLWFLYLVYFINFEAKQVLDQGLKESDVDGFVDDVLVNDKQWASGVPEAFTGSHVFVCVHASRDRRCGVCGPVLVQKLDEEIELRGLKERVFVSACSHIGGHKYGYVTPEDVSELFERHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIEENSGQSKVETIAVMDSLVAEMKVQGKVVESKTSRKKLQKSRYPKKANKFSCWTGQWEQSEILAAAAIIGAVATVAVAYSLYRRSG 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20178974 20181559 - CmoCh04G028130.1 Cmo04g02813 381788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02813 437 Pfam Sucrase/ferredoxin-like 29 293 IPR009737 -
Cmo04g02813 437 Gene3D Glutaredoxin 241 322 - -
Cmo04g02813 437 SUPERFAMILY Thioredoxin-like 243 325 IPR036249 -
Cmo04g02813 437 CDD TRX_Fd_Sucrase 241 323 IPR009737 -
Cmo04g02813 437 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 32-LIKE 9 109 - -
Cmo04g02813 437 MobiDBLite consensus disorder prediction 323 342 - -
Cmo04g02813 437 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 9 109 IPR009737 -
Cmo04g02813 437 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 210 293 IPR009737 -
Cmo04g02813 437 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 291 436 IPR009737 -
Cmo04g02813 437 MobiDBLite consensus disorder prediction 326 342 - -
Cmo04g02813 437 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 32-LIKE 291 436 - -
Cmo04g02813 437 PANTHER ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 32-LIKE 210 293 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02813 Cmo11g01662 CCT
Cmo04g02813 Cmo15g00369 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02813 Cmo-Chr4:20178974 Cmo09g01022 Cmo-Chr9:5451935 1.57E-31 dispersed
Cmo11g01662 Cmo-Chr11:11792207 Cmo04g02813 Cmo-Chr4:20178974 7.28E-31 wgd
Cmo15g00369 Cmo-Chr15:1718277 Cmo04g02813 Cmo-Chr4:20178974 1.85E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02813 - - cmo:103498108 325.094