Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02836 ATGGAGATTCCTTCAGAAAAAAGATATCCAGTGAATGCCAAGGATTATAACTTACATGAAGAAGTTGGTGAAGGCGTCAGTGCCACTGTGTACAAGGCACTGTGCATTCCACTAAAGGAGACTGTCGCTATAAAGGCTCTTGATTTGGAGAAGTGCAACAATGACCTAGATGGTATTCGGCGAGAGGTTCAAACGATGACTTTGATTGATCATCCAAATTTGTTAAAAGCACATTGTTCCTTCACTGCTGGTCACCACCTCTGGGTTGTGATGCCATACATGTCTGGGGGATCTTGCCTTCATATTATGAAATCTGCTTTTTCTGAAGGTTTTGATGAGCCTGTCATAGCTACCCTATTGCGGGAGGTTCTGAAAGCTCTTGTTTATCTTCATGCTCATGGCCACATCCATAGAGATGTGAAGGCTGGGAATATTTTGCTTGATTCTAATGGTACAGTAAAACTAGCTGATTTTGGAGTCTCGGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACATTTGTTGGAACTCCATGCTGGATGGCACCGGAAGTTATGCAGCAATTACATGGATATGACTTCAAGGCAGACATTTGGTCATTTGGAATAACAGCGCTTGAACTGGCTCATGGGCATGCTCCATTTTCTAAATACCCACCAATGAAAGTTTTGCTAATGACATTACAAAATGCTCCTCCTGGTCTTGACTATGAAAGAGATAGGAAATTTTCTAAGTCATTCAAAGAAATGGTCGCTACATGCCTAGTGAAGGATCCAAAGAAACGTCCCAGTTCAGAGAAGCTCTTAAAGCACCCTTTTTTTAAACATGCCCGTTCAGTTGATTATCTTGCTCGAACAATCCTGGATGGCCTTGATCCATTAGGGGAACGCTTTAAGAAGCTAAAGGCAAAGGAGGCTGATCTTCTGGTGCAGAACAAGGCTTTGTATGGAGACAAGGAGCATTTGTCACAGCAAGAATATATTCGAGGAATTAGTGCCTGGAACTTCAACCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGATGATATGTCAAACATGGAAGATCTAGATGTACATACAACAATGCAAAGAAACAAGAATAATGATTTTAGCTTTCCAGTAGAGGGTTCATCCCTTGAAAGTCCGAATCACCGAAGTGCTGCCGCTAGTCAGGAGGATGGTTTCAGTGATCTACATTATTTGGAGAGTTCCCTTGCTTCTTTCCCTACAAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACGGACAGTGTAAGGCCAGTCAATAGGGAAAATGGAAGAATCGAGGGTGAGAGTTCAGGGCAAAGTGGTCCCCTACCACGTCATTACATGTCAGAGAATAAGAGGTCTTATAGTGGTTCATTAATTTCTGACAATGCTGGTTCTCCTAAAAAGATTGTTGTAGATGGTGATAGGGATTATGTGCAGTCAAAATTTCCATCTGAACGTAATTTCAGTGGTCCATTATTATATCGCCAAAAAAGAGATACAAATAACATATCATCTGTTGAGGATACATCAGATGGAACAGTAGTTCAATGCAAGGGGCGGTTTAAAGTTACTTCAGCGGAGCTTAGTCCGAAGGGTCCTATGACGGGTTCATTTAGCCCAATCTGTGGAGGGACAATGAGCCCAACATCCCTGAACCTTACGCCTTCTTTACTCCTCCCATCAATGCAATGTATTCTGCAGCAGAACATCCTGCAACGGGAAGAAATCGTTAAATTGATCAAGTATTTGGAACAATTGACTGGCAAGAATCCAGATGTATCAGAGACGGCCACTAGTGACCCTCTGCAGATACCACCGGCTTCCTTGAGGGAAAGAGAGTTACAGTCTCAGGTCCTTCATCTGCAGCAGAGGATTGATAATCTCAACGAGGAATTAGAGAAGCAGAAGTTGAAAAATGCCGAGTTCGAAAGACACGTGATTTCTATGGCAAATAAAGAGAAAACATAA 2016 42.06 MEIPSEKRYPVNAKDYNLHEEVGEGVSATVYKALCIPLKETVAIKALDLEKCNNDLDGIRREVQTMTLIDHPNLLKAHCSFTAGHHLWVVMPYMSGGSCLHIMKSAFSEGFDEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKHARSVDYLARTILDGLDPLGERFKKLKAKEADLLVQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNMEDLDVHTTMQRNKNNDFSFPVEGSSLESPNHRSAAASQEDGFSDLHYLESSLASFPTKPLEALKDCFDIYEDISTDSVRPVNRENGRIEGESSGQSGPLPRHYMSENKRSYSGSLISDNAGSPKKIVVDGDRDYVQSKFPSERNFSGPLLYRQKRDTNNISSVEDTSDGTVVQCKGRFKVTSAELSPKGPMTGSFSPICGGTMSPTSLNLTPSLLLPSMQCILQQNILQREEIVKLIKYLEQLTGKNPDVSETATSDPLQIPPASLRERELQSQVLHLQQRIDNLNEELEKQKLKNAEFERHVISMANKEKT 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20276632 20285590 - CmoCh04G028360.1 Cmo04g02836 381811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02836 671 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02836 671 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Cmo04g02836 671 MobiDBLite consensus disorder prediction 439 465 - -
Cmo04g02836 671 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02836 671 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 669 - -
Cmo04g02836 671 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g02836 671 MobiDBLite consensus disorder prediction 372 396 - -
Cmo04g02836 671 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 669 - -
Cmo04g02836 671 MobiDBLite consensus disorder prediction 372 397 - -
Cmo04g02836 671 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Cmo04g02836 671 Gene3D Transferase(Phosphotransferase) domain 1 97 315 - -
Cmo04g02836 671 CDD STKc_OSR1_SPAK 14 277 - -
Cmo04g02836 671 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Cmo04g02836 671 Coils Coil 627 661 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02836 Cmo15g00350 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00200 Cmo-Chr1:897957 Cmo04g02836 Cmo-Chr4:20276632 0 dispersed
Cmo04g02836 Cmo-Chr4:20276632 Cmo06g00592 Cmo-Chr6:2913131 2.06E-180 dispersed
Cmo14g00685 Cmo-Chr14:3500450 Cmo04g02836 Cmo-Chr4:20276632 1.96E-36 dispersed
Cmo16g01271 Cmo-Chr16:9072710 Cmo04g02836 Cmo-Chr4:20276632 2.33E-37 dispersed
Cmo14g01826 Cmo-Chr14:13910049 Cmo04g02836 Cmo-Chr4:20276632 2.43E-112 transposed
Cmo15g00350 Cmo-Chr15:1636510 Cmo04g02836 Cmo-Chr4:20276632 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74324 PF00069 Pkinase 2.20E-59 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02836 K08835 - csv:101205102 1243.8