Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02846 ATGGATCCGAACTTGATCTGGGGTTATCCTGAAAAGAGGGATTCATGGAGGACAATTTTCACTTTGGCTTATCAGGGTTTGGGGGTTGTTTATGGGGATTTGAGCACTTCTCCGCTGTATGTGTACAAAAGCACTTTTGCAGAAAACCTTCAGCACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTCATAGTTCTTAAAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCACTGCTCTGCCGCCATGCTCGCCTTAGCTCCCTTCCAAATCACCAGCTTGCAGATGAGGAGCTTTCTGCTTATAAAAGAGATACACCTGAACCCACTAGTAATTTTAGTTTCAGTTCTTGTTTGAAAGCAACTCTGGAGAAATGTAAAGTTTTGCAGAGAATCTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATCGGTGATGGAGTTCTCACACCAGCAATTTCAGTCTTTTCAGCTGTGTCAGGGGTTGAGTTATCCATGGCTAAGGAACATCACCAATATATTAAAGTCCCTCTGGCATGTGCCATTTTGGTATTCTTGTTTGCATTGCAACATTACGGCACACATCGGGTCGGGTTCCTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCTCTTGTTTACAAAGCACTCTCCCCATATTACATGTATAAGTTCTTGAAAAAAACCAAAAAGCAAGGTTGGATGGCGTTGGGCGGAGTCCTCTTGTGTATAACGGGCTCGGAAGCAATGTTTGCTGATCTTGGACACTTTTCACCTTTTTCTATCAAGCTTGCTTTCACTTTTGTGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAACGATTATCGAATCGGATTCTATGTTTCTGTTCCTGAGAAAGTAAGATGGCCTGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGCAGTCAAGCAATCATCACGGGCACGTTTTCGATCATCAAACAATGTTCTTCTTTGGGTTGTTTTCCAAGAGTAAAGATCGTTCATACGTCTTCGAAAATACATGGCCAGATTTACATTCCCCTCATCAACTGGATACTAATGATATTATGTTTAGCTGTTACCATTGGATTTCGAGAGACAGAACGCTTGGGCAATGCAGCAGGGTTGGCAGTTATTACCGTTATGCTAGTCTCGACGTGTCTAATGTCACTTGTTATTGTGTTATGTTGGCATAAAAGTGTCTTCCTAGCCATAGCCTTCCTAGTCTTCTTTGGCTCCATAGAAGCTCTCTACTTTTCTGCCTCTCTTATGAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCACTTTCACTGACATTCCTTGTGGTTATGTATGTTTGGCACTATGGCACTCTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCGGTATAGGTCCCAAAATCGGGATCGTTCGGGTTCGGGGGATCGGCCTTGTACATACCGAACTCGTTTCAGGGATCCCTTCCATTTTCTCTCATTTTGTCACAAACGTTCCAGCCTTCCACCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAATGCCTCATGTGAGACCTGAGGAAAGGTTCTTGGTAGGAAGAGTTGGGCCAAAAGAGTATCGACTCTACCGCTGCATTGCACGATATGGCTACCGTGATGTGCACAAGGACGACTTGGAATTCGAGAGAGACCTCACCTGCAGCATTGCAGAATTCATCCGATCCGAGAAAACAGAATGCAACACTTCCAGACACGAGGACTTGGATGACAATGACGACAACGAAAGAATGAGAGTGATTGGGACTTCATCAACTCAACTAAACGGTATACGAATGTGTGAAAACGAATCGTGTTCTTTGCCGATCGTCAGCAGTTCAGAGATAAGGTCGGAGAGGTTGAGGAAGAAAAGAGTAAGATTCGTTCTACCCGAAAGTACGAAAATGGATGTCGATACAAGGAGAGAACTGCAAGAGTTGATGGAAGCAAGGGAGGCAGGAATGGCATTCATAATGGGACATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGGTTGTGCTTAATTATGGGTATGATTTCTTGAGGAAAAACTCAAGAGGCCCATCTTATGCTTTGAGTATTCCCAACGCTTCTACTCTTGAGGTTGAGGCCAAAACCGGTCAACTTTCTTTTCCTCTTTACTCCACTCTTCCTCTATATGTGTACCTTCAATCCCCCAAGTTTTTGAGGGTTTTCCCTCCTCAATCTTCCTCATTCTCGACAATGGCCAGGATTTCCCTCGCTTTTGCTCTCGTTTTTCTTCTTCTTTTTGGTGGGGTTTCTCCTGCTTCTGCTTCGCCTCCTGGAAAAATTGTTCGTGGGGTTGTTTCGAATGTGGTTTCTTCTCTTGTGAAGAAGTTATGGTCGATGAAATCCACTGCCAAAACTGCTGTTTCCAGCCGTTCGATGATGAAATTCGAGAGTGGATATACGGTTGAGACGGTGTTCGATGGCAGTAAGCTGGGAATCGATCCTTATTCGGTCGAGATGTCGCCTAGTGGGGAGCTGCTGATCTTAGATGCTGAAAACAGTAACATCTATAAGATCTCAATGCCATTGTCTCGATATAGCAGACCAAAACTGGTTTCAGGATCTGCAGAAGGATACCCCGGACATGTCGATGGCCATCCAAGAGAAGCAAGGATGAATCATCCGAAAGGGCTTACTTTGGATGAAAGGGGCAATATATACATTGCAGACACAATGAATATGGCTATCAGAAAGATTAGTGACACTGGGGTTACAACTATTGCTGGTGGAAGATGGAACCAAGGGAGTGGTCATATTGATGGTCCTAGTGAAGATGCAAAGTTCTCAAATGATTTTGATGTTGTTTATGTGGGAAGTAGCTGCTCTCTTTTGGTTATAGACAGAGGAAACAAGGCGATTCGAGAGATTGAACTTAACTACGACGACTGCAATACTCAATACGCTGATAGTCTCAACTTGGGGGTAGTGTTGTTGGTTGCTGCTGGTTTGTTCGGCTATCTGCTTGCTCTGCTCCAACGTAGAGTGCAAGCAGTGCTTTCTTCACCAAAGGATGAGGATGTAAGAAGTCATCAAATGAAGAAGGCTGCACAAGCTGCCCAATATCAAAGACCTCCTCTCAAGTCAGTCAGGCCTTCCTTGATTCCAAGTGAAGATGAACCAGAGAAACTGGAGGAAGGATTCTTTGGTTCGCTTGGGAGGCTTTTCGTCAACAGTGGCTCGTCTGTAGCCGACATCGTTGGGGGATTTTTGCCTGGATTTCGAAGGAAGCCTCTCAATAACCAGATCCATCAGCAGTTTCAACAAGTCAACAGACATCCAAACTCTTGGCCCTTGCAAGAAAGTTTTGTGATTCCAGATGAAGACGAGCCACCATCCATTGAAACGAAAACTCCGACAATAAAAAAAACGTATCCATTTATGACACAAGACCTCGATCGATCTCATCAGTTCAAGCCAAACAGAAACTACTTCAATGGGTGGGACAATGGTGGTGAATTCCATCAACAGCAGCAACAGCCGCAGCAGATACATCATCAACAGCAGCAGATACAGCAGCAGCCGCAGCAGCAGCAAATACAGCAGCAGCAGCAAATACAGCAGCAGCAGCAGATGCAACATCATCAGCAGCATCATTATCAGCAATATCAGCAATATCACCATCGACAATACTCTGCAGGTCCGACAACATACTACGAGAAGAATTGCGAGACGAAAGAAATTGTGTTTGGTGCAGTTCAAGAACAAGATGGACGCCGTGAAGCTATGGTGATCAAGGCTGTTGATTATGGAGATCCAAGATATAACCATCACAACATTCGAGCTCGATACAACTATACTGGTAATCCCAATTCTTATTGA 4050 43.8 MDPNLIWGYPEKRDSWRTIFTLAYQGLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLKADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYKRDTPEPTSNFSFSSCLKATLEKCKVLQRILLVLALIGTCMVIGDGVLTPAISVFSAVSGVELSMAKEHHQYIKVPLACAILVFLFALQHYGTHRVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGVLLCITGSEAMFADLGHFSPFSIKLAFTFVVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPLINWILMILCLAVTIGFRETERLGNAAGLAVITVMLVSTCLMSLVIVLCWHKSVFLAIAFLVFFGSIEALYFSASLMKFFEGAWVPIALSLTFLVVMYVWHYGTLKKYEADVENKVPINWLLGIGPKIGIVRVRGIGLVHTELVSGIPSIFSHFVTNVPAFHQILVFLCIKSVTMPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFERDLTCSIAEFIRSEKTECNTSRHEDLDDNDDNERMRVIGTSSTQLNGIRMCENESCSLPIVSSSEIRSERLRKKRVRFVLPESTKMDVDTRRELQELMEAREAGMAFIMGHSYVKAKKGSGWMKKVVLNYGYDFLRKNSRGPSYALSIPNASTLEVEAKTGQLSFPLYSTLPLYVYLQSPKFLRVFPPQSSSFSTMARISLAFALVFLLLFGGVSPASASPPGKIVRGVVSNVVSSLVKKLWSMKSTAKTAVSSRSMMKFESGYTVETVFDGSKLGIDPYSVEMSPSGELLILDAENSNIYKISMPLSRYSRPKLVSGSAEGYPGHVDGHPREARMNHPKGLTLDERGNIYIADTMNMAIRKISDTGVTTIAGGRWNQGSGHIDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNKAIREIELNYDDCNTQYADSLNLGVVLLVAAGLFGYLLALLQRRVQAVLSSPKDEDVRSHQMKKAAQAAQYQRPPLKSVRPSLIPSEDEPEKLEEGFFGSLGRLFVNSGSSVADIVGGFLPGFRRKPLNNQIHQQFQQVNRHPNSWPLQESFVIPDEDEPPSIETKTPTIKKTYPFMTQDLDRSHQFKPNRNYFNGWDNGGEFHQQQQQPQQIHHQQQQIQQQPQQQQIQQQQQIQQQQQMQHHQQHHYQQYQQYHHRQYSAGPTTYYEKNCETKEIVFGAVQEQDGRREAMVIKAVDYGDPRYNHHNIRARYNYTGNPNSY 1349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20324007 20332776 + CmoCh04G028460.1 Cmo04g02846 381821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02846 1349 MobiDBLite consensus disorder prediction 1220 1252 - -
Cmo04g02846 1349 TIGRFAM kup: potassium uptake protein 22 769 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g02846 1349 MobiDBLite consensus disorder prediction 1079 1115 - -
Cmo04g02846 1349 Pfam K+ potassium transporter 24 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g02846 1349 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 770 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g02846 1349 SUPERFAMILY NHL repeat 878 1035 - -
Cmo04g02846 1349 Gene3D - 846 1034 IPR011042 -
Cmo04g02846 1349 PANTHER POTASSIUM TRANSPORTER 6 11 770 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02846 Cmo14g00647 CCT
Cmo04g02846 Cmo11g01702 CCT
Cmo04g02846 Cmo14g00647 ECH
Cmo04g02846 Cmo11g01702 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02846 Cmo-Chr4:20324007 Cmo14g00647 Cmo-Chr14:3259642 0 dispersed
Cmo14g00789 Cmo-Chr14:4026143 Cmo04g02846 Cmo-Chr4:20324007 0 dispersed
Cmo01g01309 Cmo-Chr1:10377593 Cmo04g02846 Cmo-Chr4:20324007 1.08E-37 transposed
Cmo04g00713 Cmo-Chr4:3539679 Cmo04g02846 Cmo-Chr4:20324007 3.61E-72 transposed
Cmo15g00338 Cmo-Chr15:1576826 Cmo04g02846 Cmo-Chr4:20324007 0 transposed
Cmo11g01702 Cmo-Chr11:12075480 Cmo04g02846 Cmo-Chr4:20324007 0 wgd
Cmo14g00646 Cmo-Chr14:3254644 Cmo04g02846 Cmo-Chr4:20324007 5.78E-118 wgd
Cmo15g00337 Cmo-Chr15:1558286 Cmo04g02846 Cmo-Chr4:20324007 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02846 K03549 - csv:101218141 1398.65