Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g02849 ATGTCTGTTCCTCAATCTCCTGACCTTTCTTCCGACGTTAATGGCTTCCACACCGATGACCTTCTTCATGAGGCTGCCTTCGCCAGCCGTGGCTGCTGCTTCTGGCTTCCTTGCCTGAGGTCTAATCCATCGAAGTCCTGGTGGGAGAGGATTAGGGCTGCCGATAATGACGACGAGTGGTGGCTTCGAGGCTGGAAGAGGTTCCGCGATTGGTCCGAAATCGTTGCCGGCCCTAAATGGAAGACGTTCATTCGTCAATTTCACAAGAATCGCCATCGCCAATCTACTTACCGTTACGATCCGCTCAGTTACGCTCTCAACTTCGACGAAGGTCCAGCTCTCGACGATCCTTTCAGTGAGGACTTCATGCGCCGCGACTTCTCCATGCGATTCGCCTCCATTCCGGCCTCCGCCAAGTCGTCCATGGACCTCGGCAAGGATGGACCGTCCTTCATTTGA 459 54.47 MSVPQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEWWLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSEDFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20339956 20340414 + CmoCh04G028490.1 Cmo04g02849 381824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g02849 152 PANTHER NHL DOMAIN PROTEIN 18 151 - -
Cmo04g02849 152 PANTHER NHL DOMAIN PROTEIN 18 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02849 Cmo14g00646 CCT
Cmo04g02849 Cmo14g00646 ECH
Cmo04g02849 Cmo15g00337 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02849 Cmo-Chr4:20339956 Cmo11g00491 Cmo-Chr11:2371959 1.50E-11 dispersed
Cmo10g00143 Cmo-Chr10:659816 Cmo04g02849 Cmo-Chr4:20339956 1.52E-30 wgd
Cmo11g00107 Cmo-Chr11:557057 Cmo04g02849 Cmo-Chr4:20339956 2.80E-29 wgd
Cmo13g00927 Cmo-Chr13:8166979 Cmo04g02849 Cmo-Chr4:20339956 3.86E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g02849 - - csv:116403956 280.026